1 HisKA#1
121-175 aa · 55 aa · 16.2% of protein
Raw token
HisKA:121:0.000000276:175:61:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ACIQ48_RS02105
Histidine kinase, Classic
Bacillus mycoides · GCF_044763155
ClassHKTypeClassicLength340 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_044763155#ACIQ48_RS02105Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length340 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage165 / 340 aa (48.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa340 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-330 aa · 110 aa · 32.4% of protein
Raw token
HATPase_c:221:3.23e-20:330:110:109- Raw architecture: HisKA:121:0.000000276:175:61:64#HATPase_c:221:3.23e-20:330:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_044763155::NZ_JBIWFR010000001.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span410006-411696Genomic interval covered by the local TCS group.
Identifiers
Old locus tagACIQ48_02105RefSeq proteinWP_016126795.1
Context group ID
GCF_044763155::NZ_JBIWFR010000001.1::G00004Context members
ACIQ48_RS02105ACIQ48_RS02110
Partner locus tags
ACIQ48_RS02105ACIQ48_RS02110
Partner old locus tags
ACIQ48_02105ACIQ48_02110
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_016126795.1Primary protein accession used for annex mappings.
UniProt accessionA0AAP8KRN1Primary UniProt accession resolved in the annex database.
UniProt IDA0AAP8KRN1_BACMYDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagACIQ48_RS02105Primary locus identifier stored in the genes table.
Old locus tagACIQ48_02105Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBIWFR010000001.1Sequence record reported by the local genomic context database.
Genomic interval410 006-411 028 nt1 023 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span410 006-411 696 ntGCF_044763155::NZ_JBIWFR010000001.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_044763155::NZ_JBIWFR010000001.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBIWFR010000001.1All displayed genes belong to this local TCS context.
Neighborhood span410 006-411 696 nt1 691 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
410 006 nt411 696 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ACIQ48_RS02105GCF_044763155#ACIQ48_RS02105
HKClassicCurrent focus
410 006-411 028 nt · Reverse (-)
ACIQ48_RS02110GCF_044763155#ACIQ48_RS02110
RROmpR
411 025-411 696 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000003925#BMYCO0001_RS09015Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2836450
Simplified PFAM architecture for HKOC_2836450
PFAM domain coverage: 111 / 340 aa (32.6%)
1 aa340 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[221-331]
- Domain count: 1
- Matched identifier: HKOC_2836450
- Positioned domains: HATPase_c 221-331
Cluster members and taxonomy
Representative gene: GCF_000003925#BMYCO0001_RS09015
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_044763155
AssemblyASM4476315v1 · Scaffoldhaploid
Genome composition5 907 013 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 136 · HK 72 · RR 64CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key