1 HisKA#1
134-186 aa · 53 aa · 18.3% of protein
Raw token
HisKA:134:0.0000827:186:56:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ACFWMY_RS07730
Histidine kinase, Classic
Bacillus mycoides · GCF_042722945
ClassHKTypeClassicLength289 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_042722945#ACFWMY_RS07730Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length289 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage109 / 289 aa (37.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa289 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
234-289 aa · 56 aa · 19.4% of protein
Raw token
HATPase_c:234:0.0000000178:289:56:109- Raw architecture: HisKA:134:0.0000827:186:56:64#HATPase_c:234:0.0000000178:289:56:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_042722945::NZ_JBHXJZ010000015.1::G00024
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span72080-73644Genomic interval covered by the local TCS group.
Identifiers
Old locus tagACFWMY_07730RefSeq proteinWP_377940413.1
Context group ID
GCF_042722945::NZ_JBHXJZ010000015.1::G00024Context members
ACFWMY_RS07725ACFWMY_RS07730
Partner locus tags
ACFWMY_RS07725ACFWMY_RS07730
Partner old locus tags
ACFWMY_07725ACFWMY_07730
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_377940413.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagACFWMY_RS07730Primary locus identifier stored in the genes table.
Old locus tagACFWMY_07730Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBHXJZ010000015.1Sequence record reported by the local genomic context database.
Genomic interval72 777-73 644 nt868 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span72 080-73 644 ntGCF_042722945::NZ_JBHXJZ010000015.1::G00024
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_042722945::NZ_JBHXJZ010000015.1::G00024Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBHXJZ010000015.1All displayed genes belong to this local TCS context.
Neighborhood span72 080-73 644 nt1 565 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
72 080 nt73 644 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ACFWMY_RS07725GCF_042722945#ACFWMY_RS07725
RROmpR
72 080-72 787 nt · Forward (+)
ACFWMY_RS07730GCF_042722945#ACFWMY_RS07730
HKClassicCurrent focus
72 777-73 644 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_038007445#MKY90_RS22640Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2751355
Simplified PFAM architecture for HKOC_2751355
PFAM domain coverage: 112 / 360 aa (31.1%)
1 aa360 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[234-345]
- Domain count: 1
- Matched identifier: HKOC_2751355
- Positioned domains: HATPase_c 234-345
Cluster members and taxonomy
Representative gene: GCF_038007445#MKY90_RS22640
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_042722945
AssemblyASM4272294v1 · Scaffoldhaploid
Genome composition5 679 664 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 128 · HK 67 · RR 61CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key