1 HisKA#1
154-217 aa · 64 aa · 16.7% of protein
Raw token
HisKA:154:0.0000000000115:217:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QCI46_RS15005
Histidine kinase, Classic
Bacillus cereus group sp. RP32 · GCF_040459735
ClassHKTypeClassicLength384 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_040459735#QCI46_RS15005Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length384 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 384 aa (44.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa384 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
266-373 aa · 108 aa · 28.1% of protein
Raw token
HATPase_c:266:4.85e-23:373:110:109- Raw architecture: HisKA:154:0.0000000000115:217:64:64#HATPase_c:266:4.85e-23:373:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_040459735::NZ_JARVHO010000001.1::G00034
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span2898514-2900353Genomic interval covered by the local TCS group.
Identifiers
Old locus tagQCI46_14990RefSeq proteinWP_195756760.1
Context group ID
GCF_040459735::NZ_JARVHO010000001.1::G00034Context members
QCI46_RS15005QCI46_RS15010
Partner locus tags
QCI46_RS15005QCI46_RS15010
Partner old locus tags
QCI46_14990QCI46_14995
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_195756760.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQCI46_RS15005Primary locus identifier stored in the genes table.
Old locus tagQCI46_14990Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JARVHO010000001.1Sequence record reported by the local genomic context database.
Genomic interval2 898 514-2 899 668 nt1 155 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span2 898 514-2 900 353 ntGCF_040459735::NZ_JARVHO010000001.1::G00034
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_040459735::NZ_JARVHO010000001.1::G00034Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JARVHO010000001.1All displayed genes belong to this local TCS context.
Neighborhood span2 898 514-2 900 353 nt1 840 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
2 898 514 nt2 900 353 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
QCI46_RS15005GCF_040459735#QCI46_RS15005
HKClassicCurrent focus
2 898 514-2 899 668 nt · Reverse (-)
QCI46_RS15010GCF_040459735#QCI46_RS15010
RROmpR
2 899 658-2 900 353 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015620945#IWA68_RS25330Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2575840
Simplified PFAM architecture for HKOC_2575840
PFAM domain coverage: 172 / 384 aa (44.8%)
1 aa384 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[155-217] | HATPase_c[266-374]
- Domain count: 2
- Matched identifier: HKOC_2575840
- Positioned domains: HisKA 155-217 ; HATPase_c 266-374
Cluster members and taxonomy
Representative gene: GCF_015620945#IWA68_RS25330
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 3 040 258 · GCF_040459735
AssemblyASM4045973v1 · Contighaploid
Genome composition5 802 907 bp · 35,5% GCBacillus cereus group sp. RP32
Signal transduction countsGenes 114 · HK 61 · RR 53CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key