1 HAMP#1
39-109 aa · 71 aa · 19.8% of protein
Raw token
HAMP:39:0.000000000768:109:71:69P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
MKX77_RS07600
Histidine kinase, Classic
Bacillus sp. FSL R9-9410 · GCF_038050385
ClassHKTypeClassicLength359 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_038050385#MKX77_RS07600Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HAMPHisKAHATPase_c
Protein length359 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage250 / 359 aa (69.6%)Merged over positioned domains only.
Domain description1 HAMP,1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa359 aa
Domain-by-domain annotation3 items
2 HisKA#2
120-187 aa · 68 aa · 18.9% of protein
Raw token
HisKA:120:2.63e-18:187:68:643 HATPase_c#3
238-348 aa · 111 aa · 30.9% of protein
Raw token
HATPase_c:238:4.04e-26:348:111:109- Raw architecture: HAMP:39:0.000000000768:109:71:69#HisKA:120:2.63e-18:187:68:64#HATPase_c:238:4.04e-26:348:111:109
- Domain description: 1 HAMP,1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_038050385::NZ_JBBOTV010000001.1::G00014
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1432308-1434097Genomic interval covered by the local TCS group.
Identifiers
Old locus tagMKX77_07600RefSeq proteinWP_215553709.1
Context group ID
GCF_038050385::NZ_JBBOTV010000001.1::G00014Context members
MKX77_RS07595MKX77_RS07600
Partner locus tags
MKX77_RS07595MKX77_RS07600
Partner old locus tags
MKX77_07595MKX77_07600
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_215553709.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagMKX77_RS07600Primary locus identifier stored in the genes table.
Old locus tagMKX77_07600Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBBOTV010000001.1Sequence record reported by the local genomic context database.
Genomic interval1 433 018-1 434 097 nt1 080 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 432 308-1 434 097 ntGCF_038050385::NZ_JBBOTV010000001.1::G00014
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_038050385::NZ_JBBOTV010000001.1::G00014Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBBOTV010000001.1All displayed genes belong to this local TCS context.
Neighborhood span1 432 308-1 434 097 nt1 790 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 432 308 nt1 434 097 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
MKX77_RS07595GCF_038050385#MKX77_RS07595
RROmpR
1 432 308-1 433 021 nt · Forward (+)
MKX77_RS07600GCF_038050385#MKX77_RS07600
HKClassicCurrent focus
1 433 018-1 434 097 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_018739685#EXW62_RS15765Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2755587
Simplified PFAM architecture for HKOC_2755587
PFAM domain coverage: 178 / 359 aa (49.6%)
1 aa359 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[120-186] | HATPase_c[238-348]
- Domain count: 2
- Matched identifier: HKOC_2755587
- Positioned domains: HisKA 120-186 ; HATPase_c 238-348
Cluster members and taxonomy
Representative gene: GCF_018739685#EXW62_RS15765
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 921 590 · GCF_038050385
AssemblyASM3805038v1 · Contighaploid
Genome composition5 963 656 bp · 35,5% GCBacillus sp. FSL R9-9410
Signal transduction countsGenes 119 · HK 66 · RR 53CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key