1 HisKA#1
85-152 aa · 68 aa · 21.9% of protein
Raw token
HisKA:85:0.0000000000000148:152:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
N2V83_RS06410
Histidine kinase, Classic
Bacillus sp. FSL M7-1431 · GCF_038008405
ClassHKTypeClassicLength311 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_038008405#N2V83_RS06410Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length311 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 311 aa (57.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa311 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
198-307 aa · 110 aa · 35.4% of protein
Raw token
HATPase_c:198:2.81e-27:307:110:109- Raw architecture: HisKA:85:0.0000000000000148:152:68:64#HATPase_c:198:2.81e-27:307:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_038008405::NZ_JBBOZC010000001.1::G00019
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1182647-1184276Genomic interval covered by the local TCS group.
Identifiers
Old locus tagN2V83_06410RefSeq proteinWP_340975111.1
Context group ID
GCF_038008405::NZ_JBBOZC010000001.1::G00019Context members
N2V83_RS06405N2V83_RS06410
Partner locus tags
N2V83_RS06405N2V83_RS06410
Partner old locus tags
N2V83_06405N2V83_06410
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_340975111.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagN2V83_RS06410Primary locus identifier stored in the genes table.
Old locus tagN2V83_06410Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBBOZC010000001.1Sequence record reported by the local genomic context database.
Genomic interval1 183 341-1 184 276 nt936 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 182 647-1 184 276 ntGCF_038008405::NZ_JBBOZC010000001.1::G00019
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_038008405::NZ_JBBOZC010000001.1::G00019Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBBOZC010000001.1All displayed genes belong to this local TCS context.
Neighborhood span1 182 647-1 184 276 nt1 630 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 182 647 nt1 184 276 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
N2V83_RS06405GCF_038008405#N2V83_RS06405
RROmpR
1 182 647-1 183 339 nt · Forward (+)
N2V83_RS06410GCF_038008405#N2V83_RS06410
HKClassicCurrent focus
1 183 341-1 184 276 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_038008405#N2V83_RS06410The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2878261
Simplified PFAM architecture for HKOC_2878261
PFAM domain coverage: 174 / 311 aa (55.9%)
1 aa311 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[86-152] | HATPase_c[201-307]
- Domain count: 2
- Matched identifier: HKOC_2878261
- Positioned domains: HisKA 86-152 ; HATPase_c 201-307
Cluster members and taxonomy
Representative gene: GCF_038008405#N2V83_RS06410
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 978 219 · GCF_038008405
AssemblyASM3800840v1 · Contighaploid
Genome composition5 609 717 bp · 35,5% GCBacillus sp. FSL M7-1431
Signal transduction countsGenes 142 · HK 77 · RR 65CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key