1 HAMP#1
51-129 aa · 79 aa · 21.6% of protein
Raw token
HAMP:51:0.00000000217:129:79:69P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
MKY67_RS10305
Histidine kinase, Classic
Bacillus sp. FSL R9-9481 · GCF_038006345
ClassHKTypeClassicLength366 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_038006345#MKY67_RS10305Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HAMPHisKAHATPase_c
Protein length366 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage256 / 366 aa (69.9%)Merged over positioned domains only.
Domain description1 HAMP,1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa366 aa
Domain-by-domain annotation3 items
2 HisKA#2
133-199 aa · 67 aa · 18.3% of protein
Raw token
HisKA:133:0.000000000000022:199:67:643 HATPase_c#3
243-352 aa · 110 aa · 30.1% of protein
Raw token
HATPase_c:243:1.05e-32:352:110:109- Raw architecture: HAMP:51:0.00000000217:129:79:69#HisKA:133:0.000000000000022:199:67:64#HATPase_c:243:1.05e-32:352:110:109
- Domain description: 1 HAMP,1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_038006345::NZ_JBBOUY010000001.1::G00030
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span2039048-2040822Genomic interval covered by the local TCS group.
Identifiers
Old locus tagMKY67_10305RefSeq proteinWP_340803360.1
Context group ID
GCF_038006345::NZ_JBBOUY010000001.1::G00030Context members
MKY67_RS10300MKY67_RS10305
Partner locus tags
MKY67_RS10300MKY67_RS10305
Partner old locus tags
MKY67_10300MKY67_10305
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_340803360.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagMKY67_RS10305Primary locus identifier stored in the genes table.
Old locus tagMKY67_10305Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBBOUY010000001.1Sequence record reported by the local genomic context database.
Genomic interval2 039 722-2 040 822 nt1 101 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span2 039 048-2 040 822 ntGCF_038006345::NZ_JBBOUY010000001.1::G00030
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_038006345::NZ_JBBOUY010000001.1::G00030Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBBOUY010000001.1All displayed genes belong to this local TCS context.
Neighborhood span2 039 048-2 040 822 nt1 775 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
2 039 048 nt2 040 822 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
MKY67_RS10300GCF_038006345#MKY67_RS10300
RROmpR
2 039 048-2 039 725 nt · Forward (+)
MKY67_RS10305GCF_038006345#MKY67_RS10305
HKClassicCurrent focus
2 039 722-2 040 822 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_038006345#MKY67_RS10305The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2716588
Simplified PFAM architecture for HKOC_2716588
PFAM domain coverage: 176 / 366 aa (48.1%)
1 aa366 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[133-198] | HATPase_c[244-353]
- Domain count: 2
- Matched identifier: HKOC_2716588
- Positioned domains: HisKA 133-198 ; HATPase_c 244-353
Cluster members and taxonomy
Representative gene: GCF_038006345#MKY67_RS10305
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 921 591 · GCF_038006345
AssemblyASM3800634v1 · Contighaploid
Genome composition6 112 138 bp · 35,5% GCBacillus sp. FSL R9-9481
Signal transduction countsGenes 123 · HK 68 · RR 55CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key