1 HisKA_3#1
403-467 aa · 65 aa · 10.5% of protein
Raw token
HisKA_3:403:3.36e-17:467:65:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
MHH66_RS23760
Histidine kinase, Classic
Bacillus sp. FSL H8-0492 · GCF_038006145
ClassHKTypeClassicLength619 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_038006145#MHH66_RS23760Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length619 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage152 / 619 aa (24.6%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa619 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
517-603 aa · 87 aa · 14.1% of protein
Raw token
HATPase_c:517:0.0000000000000177:603:97:109- Raw architecture: HisKA_3:403:3.36e-17:467:65:68#HATPase_c:517:0.0000000000000177:603:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_038006145::NZ_JBBOUP010000001.1::G00058
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span4612047-4614519Genomic interval covered by the local TCS group.
Identifiers
Old locus tagMHH66_23760RefSeq proteinWP_078184679.1
Context group ID
GCF_038006145::NZ_JBBOUP010000001.1::G00058Context members
MHH66_RS23755MHH66_RS23760
Partner locus tags
MHH66_RS23755MHH66_RS23760
Partner old locus tags
MHH66_23755MHH66_23760
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_078184679.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagMHH66_RS23760Primary locus identifier stored in the genes table.
Old locus tagMHH66_23760Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBBOUP010000001.1Sequence record reported by the local genomic context database.
Genomic interval4 612 660-4 614 519 nt1 860 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span4 612 047-4 614 519 ntGCF_038006145::NZ_JBBOUP010000001.1::G00058
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_038006145::NZ_JBBOUP010000001.1::G00058Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBBOUP010000001.1All displayed genes belong to this local TCS context.
Neighborhood span4 612 047-4 614 519 nt2 473 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
4 612 047 nt4 614 519 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
MHH66_RS23755GCF_038006145#MHH66_RS23755
RRNarL
4 612 047-4 612 685 nt · Reverse (-)
MHH66_RS23760GCF_038006145#MHH66_RS23760
HKClassicCurrent focus
4 612 660-4 614 519 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002014655#BLX04_RS10430Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0975416
Simplified PFAM architecture for HKOC_0975416
PFAM domain coverage: 159 / 619 aa (25.7%)
1 aa619 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[403-467] | HATPase_c[511-604]
- Domain count: 2
- Matched identifier: HKOC_0975416
- Positioned domains: HisKA_3 403-467 ; HATPase_c 511-604
Cluster members and taxonomy
Representative gene: GCF_002014655#BLX04_RS10430
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 921 392 · GCF_038006145
AssemblyASM3800614v1 · Contighaploid
Genome composition5 536 814 bp · 35,5% GCBacillus sp. FSL H8-0492
Signal transduction countsGenes 120 · HK 63 · RR 57CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key