1 HisKA#1
208-271 aa · 64 aa · 15.3% of protein
Raw token
HisKA:208:0.000000000000708:271:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
MHH66_RS09745
Histidine kinase, Classic
Bacillus sp. FSL H8-0492 · GCF_038006145
ClassHKTypeClassicLength418 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_038006145#MHH66_RS09745Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length418 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 418 aa (38.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa418 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
323-417 aa · 95 aa · 22.7% of protein
Raw token
HATPase_c:323:1.44e-21:417:98:109- Raw architecture: HisKA:208:0.000000000000708:271:64:64#HATPase_c:323:1.44e-21:417:98:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_038006145::NZ_JBBOUP010000001.1::G00019
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span1913863-1915119Genomic interval covered by the local TCS group.
Identifiers
Old locus tagMHH66_09745RefSeq proteinWP_063217447.1
Context group ID
GCF_038006145::NZ_JBBOUP010000001.1::G00019Context members
MHH66_RS09745
Partner locus tags
MHH66_RS09745
Partner old locus tags
MHH66_09745
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_063217447.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagMHH66_RS09745Primary locus identifier stored in the genes table.
Old locus tagMHH66_09745Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBBOUP010000001.1Sequence record reported by the local genomic context database.
Genomic interval1 913 863-1 915 119 nt1 257 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span1 913 863-1 915 119 ntGCF_038006145::NZ_JBBOUP010000001.1::G00019
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_038006145::NZ_JBBOUP010000001.1::G00019Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBBOUP010000001.1All displayed genes belong to this local TCS context.
Neighborhood span1 913 863-1 915 119 nt1 257 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 913 863 nt1 915 119 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
MHH66_RS09745GCF_038006145#MHH66_RS09745
HKClassicCurrent focus
1 913 863-1 915 119 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002014655#BLX04_RS28550Use this link to inspect the representative gene detail.
PFAM architecture5TM-5TMR_LYT + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2286143
Simplified PFAM architecture for HKOC_2286143
PFAM domain coverage: 319 / 418 aa (76.3%)
1 aa418 aa
5TM-5TMR_LYTHisKAHATPase_c
- Simplified architecture: 5TM-5TMR_LYT + HisKA + HATPase_c
- Raw architecture: 5TM-5TMR_LYT[25-180] | HisKA[208-270] | HATPase_c[318-417]
- Domain count: 3
- Matched identifier: HKOC_2286143
- Positioned domains: 5TM-5TMR_LYT 25-180 ; HisKA 208-270 ; HATPase_c 318-417
Cluster members and taxonomy
Representative gene: GCF_002014655#BLX04_RS28550
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 921 392 · GCF_038006145
AssemblyASM3800614v1 · Contighaploid
Genome composition5 536 814 bp · 35,5% GCBacillus sp. FSL H8-0492
Signal transduction countsGenes 120 · HK 63 · RR 57CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key