1 HisKA_3#1
400-464 aa · 65 aa · 10.7% of protein
Raw token
HisKA_3:400:2.8e-18:464:65:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
P4365_RS10795
Histidine kinase, Classic
Bacillus wiedmannii · GCF_036217365
ClassHKTypeClassicLength607 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_036217365#P4365_RS10795Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length607 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage160 / 607 aa (26.4%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa607 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
506-600 aa · 95 aa · 15.7% of protein
Raw token
HATPase_c:506:0.0000000000000315:600:105:109- Raw architecture: HisKA_3:400:2.8e-18:464:65:68#HATPase_c:506:0.0000000000000315:600:105:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_036217365::NZ_JARMNH010000012.1::G00028
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span95177-97643Genomic interval covered by the local TCS group.
Identifiers
Old locus tagP4365_10800RefSeq proteinWP_088082571.1
Context group ID
GCF_036217365::NZ_JARMNH010000012.1::G00028Context members
P4365_RS10795P4365_RS10800
Partner locus tags
P4365_RS10795P4365_RS10800
Partner old locus tags
P4365_10800P4365_10805
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_088082571.1Primary protein accession used for annex mappings.
UniProt accessionA0A2A7X2W1Primary UniProt accession resolved in the annex database.
UniProt IDA0A2A7X2W1_9BACIDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagP4365_RS10795Primary locus identifier stored in the genes table.
Old locus tagP4365_10800Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JARMNH010000012.1Sequence record reported by the local genomic context database.
Genomic interval95 177-97 000 nt1 824 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span95 177-97 643 ntGCF_036217365::NZ_JARMNH010000012.1::G00028
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_036217365::NZ_JARMNH010000012.1::G00028Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JARMNH010000012.1All displayed genes belong to this local TCS context.
Neighborhood span95 177-97 643 nt2 467 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
95 177 nt97 643 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
P4365_RS10795GCF_036217365#P4365_RS10795
HKClassicCurrent focus
95 177-97 000 nt · Forward (+)
P4365_RS10800GCF_036217365#P4365_RS10800
RRNarL
97 002-97 643 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002147065#BK730_RS18260Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1019484
Simplified PFAM architecture for HKOC_1019484
PFAM domain coverage: 160 / 607 aa (26.4%)
1 aa607 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[400-464] | HATPase_c[507-601]
- Domain count: 2
- Matched identifier: HKOC_1019484
- Positioned domains: HisKA_3 400-464 ; HATPase_c 507-601
Cluster members and taxonomy
Representative gene: GCF_002147065#BK730_RS18260
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 890 302 · GCF_036217365
AssemblyASM3621736v1 · Scaffoldhaploid
Genome composition5 745 669 bp · 35,0% GCBacillus wiedmannii
Signal transduction countsGenes 120 · HK 63 · RR 57CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key