1 HisKA#1
257-323 aa · 67 aa · 14.0% of protein
Raw token
HisKA:257:0.0000000019:323:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
P4U27_RS07325
Histidine kinase, Classic
Bacillus mycoides · GCF_036211105
ClassHKTypeClassicLength479 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_036211105#P4U27_RS07325Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length479 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 479 aa (37.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa479 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
368-478 aa · 111 aa · 23.2% of protein
Raw token
HATPase_c:368:6.92e-21:478:112:109- Raw architecture: HisKA:257:0.0000000019:323:67:64#HATPase_c:368:6.92e-21:478:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_036211105::NZ_JARMAZ010000005.1::G00026
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span121391-123473Genomic interval covered by the local TCS group.
Identifiers
Old locus tagP4U27_07325RefSeq proteinWP_328068455.1
Context group ID
GCF_036211105::NZ_JARMAZ010000005.1::G00026Context members
P4U27_RS07320P4U27_RS07325
Partner locus tags
P4U27_RS07320P4U27_RS07325
Partner old locus tags
P4U27_07320P4U27_07325
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_328068455.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagP4U27_RS07325Primary locus identifier stored in the genes table.
Old locus tagP4U27_07325Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JARMAZ010000005.1Sequence record reported by the local genomic context database.
Genomic interval122 034-123 473 nt1 440 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span121 391-123 473 ntGCF_036211105::NZ_JARMAZ010000005.1::G00026
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_036211105::NZ_JARMAZ010000005.1::G00026Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JARMAZ010000005.1All displayed genes belong to this local TCS context.
Neighborhood span121 391-123 473 nt2 083 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
121 391 nt123 473 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
P4U27_RS07320GCF_036211105#P4U27_RS07320
RROmpR
121 391-122 056 nt · Forward (+)
P4U27_RS07325GCF_036211105#P4U27_RS07325
HKClassicCurrent focus
122 034-123 473 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_036211105#P4U27_RS07325The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1634003
Simplified PFAM architecture for HKOC_1634003
PFAM domain coverage: 174 / 479 aa (36.3%)
1 aa479 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[258-322] | HATPase_c[369-477]
- Domain count: 2
- Matched identifier: HKOC_1634003
- Positioned domains: HisKA 258-322 ; HATPase_c 369-477
Cluster members and taxonomy
Representative gene: GCF_036211105#P4U27_RS07325
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_036211105
AssemblyASM3621110v1 · Scaffoldhaploid
Genome composition5 987 934 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 129 · HK 69 · RR 60CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key