1 HisKA_3#1
177-240 aa · 64 aa · 17.1% of protein
Raw token
HisKA_3:177:1.85e-23:240:64:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
P4T67_RS15165
Histidine kinase, Classic
Bacillus mycoides · GCF_036209935
ClassHKTypeClassicLength375 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_036209935#P4T67_RS15165Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length375 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage150 / 375 aa (40.0%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa375 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
281-366 aa · 86 aa · 22.9% of protein
Raw token
HATPase_c:281:0.00000000315:366:104:109- Raw architecture: HisKA_3:177:1.85e-23:240:64:68#HATPase_c:281:0.00000000315:366:104:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_036209935::NZ_JARLYS010000029.1::G00036
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span10221-11947Genomic interval covered by the local TCS group.
Identifiers
Old locus tagP4T67_15125RefSeq proteinWP_328011050.1
Context group ID
GCF_036209935::NZ_JARLYS010000029.1::G00036Context members
P4T67_RS15165P4T67_RS15170
Partner locus tags
P4T67_RS15165P4T67_RS15170
Partner old locus tags
P4T67_15125P4T67_15130
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_328011050.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagP4T67_RS15165Primary locus identifier stored in the genes table.
Old locus tagP4T67_15125Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JARLYS010000029.1Sequence record reported by the local genomic context database.
Genomic interval10 221-11 348 nt1 128 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span10 221-11 947 ntGCF_036209935::NZ_JARLYS010000029.1::G00036
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_036209935::NZ_JARLYS010000029.1::G00036Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JARLYS010000029.1All displayed genes belong to this local TCS context.
Neighborhood span10 221-11 947 nt1 727 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
10 221 nt11 947 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
P4T67_RS15165GCF_036209935#P4T67_RS15165
HKClassicCurrent focus
10 221-11 348 nt · Forward (+)
P4T67_RS15170GCF_036209935#P4T67_RS15170
RRNarL
11 345-11 947 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_036209935#P4T67_RS15165The current gene is the representative for this cluster.
PFAM architectureDesK_N + HisKA_3 + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2654133
Simplified PFAM architecture for HKOC_2654133
PFAM domain coverage: 293 / 375 aa (78.1%)
1 aa375 aa
DesK_NHisKA_3HATPase_c
- Simplified architecture: DesK_N + HisKA_3 + HATPase_c
- Raw architecture: DesK_N[3-147] | HisKA_3[177-240] | HATPase_c[279-362]
- Domain count: 3
- Matched identifier: HKOC_2654133
- Positioned domains: DesK_N 3-147 ; HisKA_3 177-240 ; HATPase_c 279-362
Cluster members and taxonomy
Representative gene: GCF_036209935#P4T67_RS15165
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_036209935
AssemblyASM3620993v1 · Scaffoldhaploid
Genome composition5 940 240 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 117 · HK 63 · RR 54CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key