1 HisKA#1
117-169 aa · 53 aa · 16.2% of protein
Raw token
HisKA:117:0.000000192:169:59:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
P9C06_RS00090
Histidine kinase, Classic
Bacillus mycoides · GCF_036009965
ClassHKTypeClassicLength328 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_036009965#P9C06_RS00090Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length328 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage166 / 328 aa (50.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
215-327 aa · 113 aa · 34.5% of protein
Raw token
HATPase_c:215:7.98e-28:327:113:109- Raw architecture: HisKA:117:0.000000192:169:59:64#HATPase_c:215:7.98e-28:327:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_036009965::NZ_JARSHF010000001.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span22552-24245Genomic interval covered by the local TCS group.
Identifiers
Old locus tagP9C06_00085RefSeq proteinWP_002017026.1
Context group ID
GCF_036009965::NZ_JARSHF010000001.1::G00001Context members
P9C06_RS00090P9C06_RS00095
Partner locus tags
P9C06_RS00090P9C06_RS00095
Partner old locus tags
P9C06_00085P9C06_00090
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002017026.1Primary protein accession used for annex mappings.
UniProt accessionR8HNP5Primary UniProt accession resolved in the annex database.
UniProt IDR8HNP5_BACCEDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagP9C06_RS00090Primary locus identifier stored in the genes table.
Old locus tagP9C06_00085Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JARSHF010000001.1Sequence record reported by the local genomic context database.
Genomic interval22 552-23 538 nt987 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span22 552-24 245 ntGCF_036009965::NZ_JARSHF010000001.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_036009965::NZ_JARSHF010000001.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JARSHF010000001.1All displayed genes belong to this local TCS context.
Neighborhood span22 552-24 245 nt1 694 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
22 552 nt24 245 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
P9C06_RS00090GCF_036009965#P9C06_RS00090
HKClassicCurrent focus
22 552-23 538 nt · Reverse (-)
P9C06_RS00095GCF_036009965#P9C06_RS00095
RROmpR
23 541-24 245 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000003925#BMYCO0001_RS10905Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2859500
Simplified PFAM architecture for HKOC_2859500
PFAM domain coverage: 110 / 328 aa (33.5%)
1 aa328 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[216-325]
- Domain count: 1
- Matched identifier: HKOC_2859500
- Positioned domains: HATPase_c 216-325
Cluster members and taxonomy
Representative gene: GCF_000003925#BMYCO0001_RS10905
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_036009965
AssemblyASM3600996v1 · Scaffoldhaploid
Genome composition5 705 610 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 120 · HK 65 · RR 55CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key