1 HisKA#1
1-65 aa · 65 aa · 31.3% of protein
Raw token
HisKA:1:0.000000502:65:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
NNP04_RS15705
Histidine kinase, Classic
Enterococcus faecalis · GCF_032027825
ClassHKTypeClassicLength208 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_032027825#NNP04_RS15705Stable P2CS identifier used across views.
GenomeGCF_032027825Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length208 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage143 / 208 aa (68.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa208 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
111-188 aa · 78 aa · 37.5% of protein
Raw token
HATPase_c:111:0.00000267:188:90:109- Raw architecture: HisKA:1:0.000000502:65:65:64#HATPase_c:111:0.00000267:188:90:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_032027825::NZ_JANEYI010000080.1::G00018
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span1-627Genomic interval covered by the local TCS group.
Identifiers
Old locus tagNNP04_15615RefSeq proteinWP_312611062.1
Context group ID
GCF_032027825::NZ_JANEYI010000080.1::G00018Context members
NNP04_RS15705
Partner locus tags
NNP04_RS15705
Partner old locus tags
NNP04_15615
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_312611062.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagNNP04_RS15705Primary locus identifier stored in the genes table.
Old locus tagNNP04_15615Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JANEYI010000080.1Sequence record reported by the local genomic context database.
Genomic interval1-627 nt627 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1-627 ntGCF_032027825::NZ_JANEYI010000080.1::G00018
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_032027825::NZ_JANEYI010000080.1::G00018Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JANEYI010000080.1All displayed genes belong to this local TCS context.
Neighborhood span1-627 nt627 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 nt627 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
NNP04_RS15705GCF_032027825#NNP04_RS15705
HKClassicCurrent focus
1-627 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000007785#EF_RS08940Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2082206
Simplified PFAM architecture for HKOC_2082206
PFAM domain coverage: 147 / 439 aa (33.5%)
1 aa439 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[233-296] | HATPase_c[342-424]
- Domain count: 2
- Matched identifier: HKOC_2082206
- Positioned domains: HisKA 233-296 ; HATPase_c 342-424
Cluster members and taxonomy
Representative gene: GCF_000007785#EF_RS08940
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 351 · GCF_032027825
AssemblyASM3202782v1 · Contighaploid
Genome composition3 321 518 bp · 37,5% GCEnterococcus faecalis
Signal transduction countsGenes 32 · HK 14 · RR 18CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key