1 HisKA#1
258-324 aa · 67 aa · 14.0% of protein
Raw token
HisKA:258:0.00000000096:324:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QUG02_RS24185
Histidine kinase, Classic
Bacillus hominis · GCF_030348585
ClassHKTypeClassicLength480 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_030348585#QUG02_RS24185Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length480 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 480 aa (37.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa480 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
369-479 aa · 111 aa · 23.1% of protein
Raw token
HATPase_c:369:2.29e-20:479:112:109- Raw architecture: HisKA:258:0.00000000096:324:67:64#HATPase_c:369:2.29e-20:479:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_030348585::NZ_JAUCFG010000002.1::G00051
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span4547947-4550032Genomic interval covered by the local TCS group.
Identifiers
Old locus tagQUG02_24185RefSeq proteinWP_289360709.1
Context group ID
GCF_030348585::NZ_JAUCFG010000002.1::G00051Context members
QUG02_RS24180QUG02_RS24185
Partner locus tags
QUG02_RS24180QUG02_RS24185
Partner old locus tags
QUG02_24180QUG02_24185
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_289360709.1Primary protein accession used for annex mappings.
UniProt accessionA0ABT7RDX8Primary UniProt accession resolved in the annex database.
UniProt IDA0ABT7RDX8_9BACIDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQUG02_RS24185Primary locus identifier stored in the genes table.
Old locus tagQUG02_24185Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAUCFG010000002.1Sequence record reported by the local genomic context database.
Genomic interval4 548 590-4 550 032 nt1 443 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span4 547 947-4 550 032 ntGCF_030348585::NZ_JAUCFG010000002.1::G00051
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_030348585::NZ_JAUCFG010000002.1::G00051Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAUCFG010000002.1All displayed genes belong to this local TCS context.
Neighborhood span4 547 947-4 550 032 nt2 086 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
4 547 947 nt4 550 032 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
QUG02_RS24180GCF_030348585#QUG02_RS24180
RROmpR
4 547 947-4 548 612 nt · Forward (+)
QUG02_RS24185GCF_030348585#QUG02_RS24185
HKClassicCurrent focus
4 548 590-4 550 032 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_030348325#QUF93_RS26540Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1624883
Simplified PFAM architecture for HKOC_1624883
PFAM domain coverage: 174 / 480 aa (36.3%)
1 aa480 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[259-323] | HATPase_c[370-478]
- Domain count: 2
- Matched identifier: HKOC_1624883
- Positioned domains: HisKA 259-323 ; HATPase_c 370-478
Cluster members and taxonomy
Representative gene: GCF_030348325#QUF93_RS26540
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 817 478 · GCF_030348585
AssemblyASM3034858v1 · Contighaploid
Genome composition5 499 162 bp · 35,5% GCBacillus hominis
Signal transduction countsGenes 103 · HK 57 · RR 46CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key