1 HisKA#1
121-175 aa · 55 aa · 16.3% of protein
Raw token
HisKA:121:0.000000631:175:61:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QUF93_RS00570
Histidine kinase, Classic
Bacillus hominis · GCF_030348325
ClassHKTypeClassicLength338 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_030348325#QUF93_RS00570Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length338 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage165 / 338 aa (48.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa338 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-330 aa · 110 aa · 32.5% of protein
Raw token
HATPase_c:221:2.38e-22:330:110:109- Raw architecture: HisKA:121:0.000000631:175:61:64#HATPase_c:221:2.38e-22:330:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_030348325::NZ_JAUCFS010000003.1::G00059
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span31599-33283Genomic interval covered by the local TCS group.
Identifiers
Old locus tagQUF93_00575RefSeq proteinWP_289375102.1
Context group ID
GCF_030348325::NZ_JAUCFS010000003.1::G00059Context members
QUF93_RS00565QUF93_RS00570
Partner locus tags
QUF93_RS00565QUF93_RS00570
Partner old locus tags
QUF93_00570QUF93_00575
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_289375102.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQUF93_RS00570Primary locus identifier stored in the genes table.
Old locus tagQUF93_00575Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAUCFS010000003.1Sequence record reported by the local genomic context database.
Genomic interval32 267-33 283 nt1 017 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span31 599-33 283 ntGCF_030348325::NZ_JAUCFS010000003.1::G00059
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_030348325::NZ_JAUCFS010000003.1::G00059Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAUCFS010000003.1All displayed genes belong to this local TCS context.
Neighborhood span31 599-33 283 nt1 685 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
31 599 nt33 283 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
QUF93_RS00565GCF_030348325#QUF93_RS00565
RROmpR
31 599-32 270 nt · Forward (+)
QUF93_RS00570GCF_030348325#QUF93_RS00570
HKClassicCurrent focus
32 267-33 283 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_030348325#QUF93_RS00570The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2843436
Simplified PFAM architecture for HKOC_2843436
PFAM domain coverage: 111 / 338 aa (32.8%)
1 aa338 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[221-331]
- Domain count: 1
- Matched identifier: HKOC_2843436
- Positioned domains: HATPase_c 221-331
Cluster members and taxonomy
Representative gene: GCF_030348325#QUF93_RS00570
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 817 478 · GCF_030348325
AssemblyASM3034832v1 · Contigreference genome · haploid
Genome composition5 526 302 bp · 35,5% GCBacillus hominis
Signal transduction countsGenes 103 · HK 57 · RR 46CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key