1 HAMP#1
93-163 aa · 71 aa · 18.1% of protein
Raw token
HAMP:93:0.000000000251:163:71:69P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QRY07_RS00105
Histidine kinase, Classic
Bacillus cereus · GCF_030291955
ClassHKTypeClassicLength392 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_030291955#QRY07_RS00105Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HAMPHisKAHATPase_c
Protein length392 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage248 / 392 aa (63.3%)Merged over positioned domains only.
Domain description1 HAMP,1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa392 aa
Domain-by-domain annotation3 items
2 HisKA#2
167-233 aa · 67 aa · 17.1% of protein
Raw token
HisKA:167:0.000000000000967:233:67:643 HATPase_c#3
275-384 aa · 110 aa · 28.1% of protein
Raw token
HATPase_c:275:3.49e-30:384:110:109- Raw architecture: HAMP:93:0.000000000251:163:71:69#HisKA:167:0.000000000000967:233:67:64#HATPase_c:275:3.49e-30:384:110:109
- Domain description: 1 HAMP,1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_030291955::NZ_CP128105.1::G00065
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span18678-20535Genomic interval covered by the local TCS group.
Identifiers
Old locus tagQRY07_00105RefSeq proteinWP_286118691.1
Context group ID
GCF_030291955::NZ_CP128105.1::G00065Context members
QRY07_RS00105QRY07_RS00110
Partner locus tags
QRY07_RS00105QRY07_RS00110
Partner old locus tags
QRY07_00105QRY07_00110
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_286118691.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQRY07_RS00105Primary locus identifier stored in the genes table.
Old locus tagQRY07_00105Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP128105.1Sequence record reported by the local genomic context database.
Genomic interval18 678-19 856 nt1 179 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span18 678-20 535 ntGCF_030291955::NZ_CP128105.1::G00065
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_030291955::NZ_CP128105.1::G00065Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP128105.1All displayed genes belong to this local TCS context.
Neighborhood span18 678-20 535 nt1 858 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
18 678 nt20 535 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
QRY07_RS00105GCF_030291955#QRY07_RS00105
HKClassicCurrent focus
18 678-19 856 nt · Reverse (-)
QRY07_RS00110GCF_030291955#QRY07_RS00110
RROmpR
19 846-20 535 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_030291955#QRY07_RS00105The current gene is the representative for this cluster.
PFAM architectureHAMP + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2515325
Simplified PFAM architecture for HKOC_2515325
PFAM domain coverage: 228 / 392 aa (58.2%)
1 aa392 aa
HAMPHisKAHATPase_c
- Simplified architecture: HAMP + HisKA + HATPase_c
- Raw architecture: HAMP[111-162] | HisKA[168-233] | HATPase_c[276-385]
- Domain count: 3
- Matched identifier: HKOC_2515325
- Positioned domains: HAMP 111-162 ; HisKA 168-233 ; HATPase_c 276-385
Cluster members and taxonomy
Representative gene: GCF_030291955#QRY07_RS00105
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_030291955
AssemblyASM3029195v1 · Complete Genomehaploid
Genome composition5 332 520 bp · 35,5% GCBacillus cereus
Signal transduction countsGenes 117 · HK 64 · RR 53CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key