1 HisKA#1
508-574 aa · 67 aa · 9.2% of protein
Raw token
HisKA:508:9.13e-19:574:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
PHA32_RS11730
Histidine kinase, Classic
Faecalibacillus intestinalis · GCF_027668845
ClassHKTypeClassicLength731 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_027668845#PHA32_RS11730Stable P2CS identifier used across views.
GenomeGCF_027668845Bacteria; Bacillati; Bacillota; Erysipelotrichia; Erysipelotrichales; Coprobacillaceae; Faecalibacillus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length731 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage171 / 731 aa (23.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa731 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
621-724 aa · 104 aa · 14.2% of protein
Raw token
HATPase_c:621:0.0000000000313:724:108:109- Raw architecture: HisKA:508:9.13e-19:574:67:64#HATPase_c:621:0.0000000000313:724:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_027668845::NZ_JAQEDZ010000017.1::G00013
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span8563-10758Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_027668845::NZ_JAQEDZ010000017.1::G00013Context members
PHA32_RS11730
Partner locus tags
PHA32_RS11730
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_117481700.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagPHA32_RS11730Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JAQEDZ010000017.1Sequence record reported by the local genomic context database.
Genomic interval8 563-10 758 nt2 196 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span8 563-10 758 ntGCF_027668845::NZ_JAQEDZ010000017.1::G00013
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_027668845::NZ_JAQEDZ010000017.1::G00013Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAQEDZ010000017.1All displayed genes belong to this local TCS context.
Neighborhood span8 563-10 758 nt2 196 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
8 563 nt10 758 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
PHA32_RS11730GCF_027668845#PHA32_RS11730
HKClassicCurrent focus
8 563-10 758 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015669615#I4U79_RS10900Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0711105
Simplified PFAM architecture for HKOC_0711105
PFAM domain coverage: 162 / 731 aa (22.2%)
1 aa731 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[508-574] | HATPase_c[621-715]
- Domain count: 2
- Matched identifier: HKOC_0711105
- Positioned domains: HisKA 508-574 ; HATPase_c 621-715
Cluster members and taxonomy
Representative gene: GCF_015669615#I4U79_RS10900
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 982 626 · GCF_027668845
AssemblyASM2766884v1 · Scaffoldhaploid
Genome composition2 903 001 bp · 29,5% GCFaecalibacillus intestinalis
Signal transduction countsGenes 57 · HK 21 · RR 35CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassErysipelotrichiaOrderErysipelotrichalesFamilyCoprobacillaceaeGenusFaecalibacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Erysipelotrichia5Erysipelotrichales6Coprobacillaceae7Faecalibacillus
Related genes
Preview from the same derived genome key