1 HisKA#1
134-186 aa · 53 aa · 14.7% of protein
Raw token
HisKA:134:0.0000111:186:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
MMS27_RS10285
Histidine kinase, Classic
Bacillus wiedmannii · GCF_022458675
ClassHKTypeClassicLength360 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_022458675#MMS27_RS10285Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length360 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage164 / 360 aa (45.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa360 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
234-344 aa · 111 aa · 30.8% of protein
Raw token
HATPase_c:234:6.57e-25:344:111:109- Raw architecture: HisKA:134:0.0000111:186:53:64#HATPase_c:234:6.57e-25:344:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_022458675::NZ_JAKGBQ010000006.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span77120-78899Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_022458675::NZ_JAKGBQ010000006.1::G00022Context members
MMS27_RS10285MMS27_RS10290
Partner locus tags
MMS27_RS10285MMS27_RS10290
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_240368377.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagMMS27_RS10285Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JAKGBQ010000006.1Sequence record reported by the local genomic context database.
Genomic interval77 120-78 202 nt1 083 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span77 120-78 899 ntGCF_022458675::NZ_JAKGBQ010000006.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_022458675::NZ_JAKGBQ010000006.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAKGBQ010000006.1All displayed genes belong to this local TCS context.
Neighborhood span77 120-78 899 nt1 780 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
77 120 nt78 899 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
MMS27_RS10285GCF_022458675#MMS27_RS10285
HKClassicCurrent focus
77 120-78 202 nt · Reverse (-)
MMS27_RS10290GCF_022458675#MMS27_RS10290
RROmpR
78 192-78 899 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_022458675#MMS27_RS10285The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2750162
Simplified PFAM architecture for HKOC_2750162
PFAM domain coverage: 112 / 360 aa (31.1%)
1 aa360 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[234-345]
- Domain count: 1
- Matched identifier: HKOC_2750162
- Positioned domains: HATPase_c 234-345
Cluster members and taxonomy
Representative gene: GCF_022458675#MMS27_RS10285
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 890 302 · GCF_022458675
AssemblyASM2245867v1 · Contighaploid
Genome composition5 845 085 bp · 35,0% GCBacillus wiedmannii
Signal transduction countsGenes 122 · HK 65 · RR 57CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key