1 HisKA#1
318-385 aa · 68 aa · 12.5% of protein
Raw token
HisKA:318:0.00000000000557:385:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
L0N02_RS11130
Histidine kinase, Classic
Blautia faecis · GCF_022136135
ClassHKTypeClassicLength545 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_022136135#L0N02_RS11130Stable P2CS identifier used across views.
GenomeGCF_022136135Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length545 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage181 / 545 aa (33.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa545 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
428-540 aa · 113 aa · 20.7% of protein
Raw token
HATPase_c:428:4.08e-31:540:113:109- Raw architecture: HisKA:318:0.00000000000557:385:68:64#HATPase_c:428:4.08e-31:540:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_022136135::NZ_JAKNGB010000029.1::G00037
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span14046-16395Genomic interval covered by the local TCS group.
Identifiers
Old locus tagL0N02_11130RefSeq proteinWP_237925827.1
Context group ID
GCF_022136135::NZ_JAKNGB010000029.1::G00037Context members
L0N02_RS11130L0N02_RS11135
Partner locus tags
L0N02_RS11130L0N02_RS11135
Partner old locus tags
L0N02_11130L0N02_11135
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_237925827.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagL0N02_RS11130Primary locus identifier stored in the genes table.
Old locus tagL0N02_11130Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAKNGB010000029.1Sequence record reported by the local genomic context database.
Genomic interval14 046-15 683 nt1 638 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span14 046-16 395 ntGCF_022136135::NZ_JAKNGB010000029.1::G00037
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_022136135::NZ_JAKNGB010000029.1::G00037Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAKNGB010000029.1All displayed genes belong to this local TCS context.
Neighborhood span14 046-16 395 nt2 350 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
14 046 nt16 395 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
L0N02_RS11130GCF_022136135#L0N02_RS11130
HKClassicCurrent focus
14 046-15 683 nt · Forward (+)
L0N02_RS11135GCF_022136135#L0N02_RS11135
RROmpR
15 676-16 395 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015552475#I2D95_RS00800Use this link to inspect the representative gene detail.
PFAM architectureDUF4118 + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1307502
Simplified PFAM architecture for HKOC_1307502
PFAM domain coverage: 287 / 545 aa (52.7%)
1 aa545 aa
DUF4118HisKAHATPase_c
- Simplified architecture: DUF4118 + HisKA + HATPase_c
- Raw architecture: DUF4118[48-155] | HisKA[318-385] | HATPase_c[429-539]
- Domain count: 3
- Matched identifier: HKOC_1307502
- Positioned domains: DUF4118 48-155 ; HisKA 318-385 ; HATPase_c 429-539
Cluster members and taxonomy
Representative gene: GCF_015552475#I2D95_RS00800
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_022136135
AssemblyContighaploid
Genome composition4 573 545 bp · 42,5% GCBlautia faecis
Signal transduction countsGenes 135 · HK 67 · RR 67CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key