1 HisKA#1
152-215 aa · 64 aa · 17.1% of protein
Raw token
HisKA:152:0.0000000000103:215:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
L0N02_RS03885
Histidine kinase, Classic
Blautia faecis · GCF_022136135
ClassHKTypeClassicLength375 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_022136135#L0N02_RS03885Stable P2CS identifier used across views.
GenomeGCF_022136135Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length375 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage176 / 375 aa (46.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa375 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
264-375 aa · 112 aa · 29.9% of protein
Raw token
HATPase_c:264:2.07e-24:375:113:109- Raw architecture: HisKA:152:0.0000000000103:215:64:64#HATPase_c:264:2.07e-24:375:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_022136135::NZ_JAKNGB010000007.1::G00073
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span60182-62018Genomic interval covered by the local TCS group.
Identifiers
Old locus tagL0N02_03885RefSeq proteinWP_202017134.1
Context group ID
GCF_022136135::NZ_JAKNGB010000007.1::G00073Context members
L0N02_RS03885L0N02_RS03890
Partner locus tags
L0N02_RS03885L0N02_RS03890
Partner old locus tags
L0N02_03885L0N02_03890
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_202017134.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagL0N02_RS03885Primary locus identifier stored in the genes table.
Old locus tagL0N02_03885Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAKNGB010000007.1Sequence record reported by the local genomic context database.
Genomic interval60 182-61 309 nt1 128 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span60 182-62 018 ntGCF_022136135::NZ_JAKNGB010000007.1::G00073
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_022136135::NZ_JAKNGB010000007.1::G00073Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAKNGB010000007.1All displayed genes belong to this local TCS context.
Neighborhood span60 182-62 018 nt1 837 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
60 182 nt62 018 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
L0N02_RS03885GCF_022136135#L0N02_RS03885
HKClassicCurrent focus
60 182-61 309 nt · Reverse (-)
L0N02_RS03890GCF_022136135#L0N02_RS03890
RROmpR
61 299-62 018 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_013300845#G5B24_RS18105Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2651836
Simplified PFAM architecture for HKOC_2651836
PFAM domain coverage: 174 / 375 aa (46.4%)
1 aa375 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[153-216] | HATPase_c[265-374]
- Domain count: 2
- Matched identifier: HKOC_2651836
- Positioned domains: HisKA 153-216 ; HATPase_c 265-374
Cluster members and taxonomy
Representative gene: GCF_013300845#G5B24_RS18105
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_022136135
AssemblyContighaploid
Genome composition4 573 545 bp · 42,5% GCBlautia faecis
Signal transduction countsGenes 135 · HK 67 · RR 67CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key