1 HisKA#1
134-186 aa · 53 aa · 14.7% of protein
Raw token
HisKA:134:0.0000338:186:56:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
AR454_RS27385
Histidine kinase, Classic
Bacillus mycoides · GCF_021097345
ClassHKTypeClassicLength360 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_021097345#AR454_RS27385Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length360 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage164 / 360 aa (45.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa360 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
234-344 aa · 111 aa · 30.8% of protein
Raw token
HATPase_c:234:8.6e-24:344:112:109- Raw architecture: HisKA:134:0.0000338:186:56:64#HATPase_c:234:8.6e-24:344:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_021097345::NZ_LLZX01000231.1::G00066
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span12855-14634Genomic interval covered by the local TCS group.
Identifiers
Old locus tagAR454_08230RefSeq proteinWP_033713770.1
Context group ID
GCF_021097345::NZ_LLZX01000231.1::G00066Context members
AR454_RS27385AR454_RS27390
Partner locus tags
AR454_RS27385AR454_RS27390
Partner old locus tags
AR454_08230AR454_08235
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_033713770.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagAR454_RS27385Primary locus identifier stored in the genes table.
Old locus tagAR454_08230Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LLZX01000231.1Sequence record reported by the local genomic context database.
Genomic interval12 855-13 937 nt1 083 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span12 855-14 634 ntGCF_021097345::NZ_LLZX01000231.1::G00066
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_021097345::NZ_LLZX01000231.1::G00066Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LLZX01000231.1All displayed genes belong to this local TCS context.
Neighborhood span12 855-14 634 nt1 780 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
12 855 nt14 634 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
AR454_RS27385GCF_021097345#AR454_RS27385
HKClassicCurrent focus
12 855-13 937 nt · Reverse (-)
AR454_RS27390GCF_021097345#AR454_RS27390
RROmpR
13 927-14 634 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000290695#IKM_RS05615Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2747122
Simplified PFAM architecture for HKOC_2747122
PFAM domain coverage: 112 / 360 aa (31.1%)
1 aa360 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[234-345]
- Domain count: 1
- Matched identifier: HKOC_2747122
- Positioned domains: HATPase_c 234-345
Cluster members and taxonomy
Representative gene: GCF_000290695#IKM_RS05615
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_021097345
AssemblyASM2109734v1 · Scaffoldhaploid
Genome composition5 781 761 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 122 · HK 63 · RR 58CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key