1 Response_reg#1
8-120 aa · 113 aa · 50.2% of protein
Raw token
Response_reg:8:1.73e-31:120:113:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
KPL75_RS03545
Response regulator NarL family
Bacillus sp. NP247 · GCF_018966865
ClassRRTypeNarLLength225 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_018966865#KPL75_RS03545Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
Response_regHTH_LUXR
Protein length225 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage171 / 225 aa (76.0%)Merged over positioned domains only.
Domain description1 Response_reg,1 HTH_LUXRSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa225 aa
Domain-by-domain annotation2 items
2 HTH_LUXR#2
161-218 aa · 58 aa · 25.8% of protein
Raw token
HTH_LUXR:161:1.99e-23:218:58:58- Raw architecture: Response_reg:8:1.73e-31:120:113:111#HTH_LUXR:161:1.99e-23:218:58:58
- Domain description: 1 Response_reg,1 HTH_LUXR
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_018966865::NZ_CP076653.1::G00011
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span665974-667889Genomic interval covered by the local TCS group.
Identifiers
Old locus tagKPL75_03540RefSeq proteinWP_309137446.1
Context group ID
GCF_018966865::NZ_CP076653.1::G00011Context members
KPL75_RS03545KPL75_RS03550
Partner locus tags
KPL75_RS03545KPL75_RS03550
Partner old locus tags
KPL75_03540KPL75_03545
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_309137446.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagKPL75_RS03545Primary locus identifier stored in the genes table.
Old locus tagKPL75_03540Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP076653.1Sequence record reported by the local genomic context database.
Genomic interval665 974-666 651 nt678 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span665 974-667 889 ntGCF_018966865::NZ_CP076653.1::G00011
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_018966865::NZ_CP076653.1::G00011Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP076653.1All displayed genes belong to this local TCS context.
Neighborhood span665 974-667 889 nt1 916 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
665 974 nt667 889 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
KPL75_RS03545GCF_018966865#KPL75_RS03545
RRNarLCurrent focus
665 974-666 651 nt · Reverse (-)
KPL75_RS03550GCF_018966865#KPL75_RS03550
HKClassic
666 669-667 889 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015071065#FT637_RS20810Use this link to inspect the representative gene detail.
PFAM architectureResponse_reg + GerE2 domains in the representative PFAM annotation.
PFAM architecture for RROC_1491321
Simplified PFAM architecture for RROC_1491321
PFAM domain coverage: 169 / 225 aa (75.1%)
1 aa225 aa
Response_regGerE
- Simplified architecture: Response_reg + GerE
- Raw architecture: Response_reg[8-120] | GerE[163-218]
- Domain count: 2
- Matched identifier: RROC_1491321
- Positioned domains: Response_reg 8-120 ; GerE 163-218
Cluster members and taxonomy
Representative gene: GCF_015071065#FT637_RS20810
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 846 779 · GCF_018966865
AssemblyASM1896686v1 · Complete Genomehaploid
Genome composition5 280 486 bp · 35,5% GCBacillus sp. NP247
Signal transduction countsGenes 117 · HK 63 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key