1 HAMP#1
153-224 aa · 72 aa · 15.8% of protein
Raw token
HAMP:153:0.000000000000107:224:72:69P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
KPL75_RS02240
Histidine kinase, Classic
Bacillus sp. NP247 · GCF_018966865
ClassHKTypeClassicLength455 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_018966865#KPL75_RS02240Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HAMPHisKAHATPase_c
Protein length455 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage250 / 455 aa (54.9%)Merged over positioned domains only.
Domain description1 HAMP,1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa455 aa
Domain-by-domain annotation3 items
2 HisKA#2
231-294 aa · 64 aa · 14.1% of protein
Raw token
HisKA:231:0.000000000000504:294:64:643 HATPase_c#3
340-453 aa · 114 aa · 25.1% of protein
Raw token
HATPase_c:340:3.8e-27:453:115:109- Raw architecture: HAMP:153:0.000000000000107:224:72:69#HisKA:231:0.000000000000504:294:64:64#HATPase_c:340:3.8e-27:453:115:109
- Domain description: 1 HAMP,1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_018966865::NZ_CP076653.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span412777-414815Genomic interval covered by the local TCS group.
Identifiers
Old locus tagKPL75_02235RefSeq proteinWP_219919234.1
Context group ID
GCF_018966865::NZ_CP076653.1::G00004Context members
KPL75_RS02240KPL75_RS02245
Partner locus tags
KPL75_RS02240KPL75_RS02245
Partner old locus tags
KPL75_02235KPL75_02240
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_219919234.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagKPL75_RS02240Primary locus identifier stored in the genes table.
Old locus tagKPL75_02235Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP076653.1Sequence record reported by the local genomic context database.
Genomic interval412 777-414 144 nt1 368 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span412 777-414 815 ntGCF_018966865::NZ_CP076653.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_018966865::NZ_CP076653.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP076653.1All displayed genes belong to this local TCS context.
Neighborhood span412 777-414 815 nt2 039 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
412 777 nt414 815 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
KPL75_RS02240GCF_018966865#KPL75_RS02240
HKClassicCurrent focus
412 777-414 144 nt · Reverse (-)
KPL75_RS02245GCF_018966865#KPL75_RS02245
RROmpR
414 141-414 815 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_018966865#KPL75_RS02240The current gene is the representative for this cluster.
PFAM architectureHAMP + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1905358
Simplified PFAM architecture for HKOC_1905358
PFAM domain coverage: 232 / 455 aa (51.0%)
1 aa455 aa
HAMPHisKAHATPase_c
- Simplified architecture: HAMP + HisKA + HATPase_c
- Raw architecture: HAMP[169-223] | HisKA[230-294] | HATPase_c[341-452]
- Domain count: 3
- Matched identifier: HKOC_1905358
- Positioned domains: HAMP 169-223 ; HisKA 230-294 ; HATPase_c 341-452
Cluster members and taxonomy
Representative gene: GCF_018966865#KPL75_RS02240
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 846 779 · GCF_018966865
AssemblyASM1896686v1 · Complete Genomehaploid
Genome composition5 280 486 bp · 35,5% GCBacillus sp. NP247
Signal transduction countsGenes 117 · HK 63 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key