1 HisKA#1
255-321 aa · 67 aa · 14.0% of protein
Raw token
HisKA:255:0.00000000118:321:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
EXW46_RS09300
Histidine kinase, Classic
Bacillus mycoides · GCF_018741505
ClassHKTypeClassicLength477 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_018741505#EXW46_RS09300Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length477 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 477 aa (37.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa477 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
366-476 aa · 111 aa · 23.3% of protein
Raw token
HATPase_c:366:1.75e-21:476:112:109- Raw architecture: HisKA:255:0.00000000118:321:67:64#HATPase_c:366:1.75e-21:476:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_018741505::NZ_CP036085.1::G00028
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1843103-1845179Genomic interval covered by the local TCS group.
Identifiers
Old locus tagEXW46_09465RefSeq proteinWP_131246985.1
Context group ID
GCF_018741505::NZ_CP036085.1::G00028Context members
EXW46_RS09300EXW46_RS09305
Partner locus tags
EXW46_RS09300EXW46_RS09305
Partner old locus tags
EXW46_09465EXW46_09470
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_131246985.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagEXW46_RS09300Primary locus identifier stored in the genes table.
Old locus tagEXW46_09465Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP036085.1Sequence record reported by the local genomic context database.
Genomic interval1 843 103-1 844 536 nt1 434 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span1 843 103-1 845 179 ntGCF_018741505::NZ_CP036085.1::G00028
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_018741505::NZ_CP036085.1::G00028Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP036085.1All displayed genes belong to this local TCS context.
Neighborhood span1 843 103-1 845 179 nt2 077 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 843 103 nt1 845 179 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
EXW46_RS09300GCF_018741505#EXW46_RS09300
HKClassicCurrent focus
1 843 103-1 844 536 nt · Reverse (-)
EXW46_RS09305GCF_018741505#EXW46_RS09305
RROmpR
1 844 514-1 845 179 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_004330345#E0M27_RS20675Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1647965
Simplified PFAM architecture for HKOC_1647965
PFAM domain coverage: 174 / 477 aa (36.5%)
1 aa477 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[256-320] | HATPase_c[367-475]
- Domain count: 2
- Matched identifier: HKOC_1647965
- Positioned domains: HisKA 256-320 ; HATPase_c 367-475
Cluster members and taxonomy
Representative gene: GCF_004330345#E0M27_RS20675
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_018741505
AssemblyASM1874150v1 · Complete Genomehaploid
Genome composition5 490 614 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 138 · HK 75 · RR 63CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key