1 HisKA_3#1
177-244 aa · 68 aa · 18.0% of protein
Raw token
HisKA_3:177:1.05e-18:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
EXW51_RS09080
Histidine kinase, Classic
Bacillus mycoides · GCF_018741005
ClassHKTypeClassicLength377 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_018741005#EXW51_RS09080Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length377 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage148 / 377 aa (39.3%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa377 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-368 aa · 80 aa · 21.2% of protein
Raw token
HATPase_c:289:0.0000000000923:368:100:109- Raw architecture: HisKA_3:177:1.05e-18:244:68:68#HATPase_c:289:0.0000000000923:368:100:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_018741005::NZ_CP036043.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1694382-1696158Genomic interval covered by the local TCS group.
Identifiers
Old locus tagEXW51_09260RefSeq proteinWP_078184280.1
Context group ID
GCF_018741005::NZ_CP036043.1::G00022Context members
EXW51_RS09075EXW51_RS09080
Partner locus tags
EXW51_RS09075EXW51_RS09080
Partner old locus tags
EXW51_09255EXW51_09260
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_078184280.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagEXW51_RS09080Primary locus identifier stored in the genes table.
Old locus tagEXW51_09260Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP036043.1Sequence record reported by the local genomic context database.
Genomic interval1 695 025-1 696 158 nt1 134 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 694 382-1 696 158 ntGCF_018741005::NZ_CP036043.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_018741005::NZ_CP036043.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP036043.1All displayed genes belong to this local TCS context.
Neighborhood span1 694 382-1 696 158 nt1 777 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 694 382 nt1 696 158 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
EXW51_RS09075GCF_018741005#EXW51_RS09075
RRNarL
1 694 382-1 695 020 nt · Forward (+)
EXW51_RS09080GCF_018741005#EXW51_RS09080
HKClassicCurrent focus
1 695 025-1 696 158 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002014655#BLX04_RS03545Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2635333
Simplified PFAM architecture for HKOC_2635333
PFAM domain coverage: 146 / 377 aa (38.7%)
1 aa377 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[177-243] | HATPase_c[289-367]
- Domain count: 2
- Matched identifier: HKOC_2635333
- Positioned domains: HisKA_3 177-243 ; HATPase_c 289-367
Cluster members and taxonomy
Representative gene: GCF_002014655#BLX04_RS03545
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_018741005
AssemblyASM1874100v1 · Complete Genomehaploid
Genome composition5 951 634 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 128 · HK 69 · RR 59CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key