1 HisKA_3#1
194-259 aa · 66 aa · 16.6% of protein
Raw token
HisKA_3:194:4.04e-20:259:66:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
EXW49_RS01215
Histidine kinase, Classic
Bacillus mycoides · GCF_018739645
ClassHKTypeClassicLength397 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_018739645#EXW49_RS01215Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length397 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 397 aa (39.0%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
300-388 aa · 89 aa · 22.4% of protein
Raw token
HATPase_c:300:0.0000000000000625:388:107:109- Raw architecture: HisKA_3:194:4.04e-20:259:66:68#HATPase_c:300:0.0000000000000625:388:107:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_018739645::NZ_CP036023.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span214003-215849Genomic interval covered by the local TCS group.
Identifiers
Old locus tagEXW49_01230RefSeq proteinWP_016103284.1
Context group ID
GCF_018739645::NZ_CP036023.1::G00001Context members
EXW49_RS01215EXW49_RS01220
Partner locus tags
EXW49_RS01215EXW49_RS01220
Partner old locus tags
EXW49_01230EXW49_01235
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_016103284.1Primary protein accession used for annex mappings.
UniProt accessionR8GZT3Primary UniProt accession resolved in the annex database.
UniProt IDR8GZT3_BACCEDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagEXW49_RS01215Primary locus identifier stored in the genes table.
Old locus tagEXW49_01230Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP036023.1Sequence record reported by the local genomic context database.
Genomic interval214 003-215 196 nt1 194 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span214 003-215 849 ntGCF_018739645::NZ_CP036023.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_018739645::NZ_CP036023.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP036023.1All displayed genes belong to this local TCS context.
Neighborhood span214 003-215 849 nt1 847 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
214 003 nt215 849 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
EXW49_RS01215GCF_018739645#EXW49_RS01215
HKClassicCurrent focus
214 003-215 196 nt · Forward (+)
EXW49_RS01220GCF_018739645#EXW49_RS01220
RRNarL
215 193-215 849 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000399145#IIC_RS30050Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2470119
Simplified PFAM architecture for HKOC_2470119
PFAM domain coverage: 153 / 397 aa (38.5%)
1 aa397 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[194-259] | HATPase_c[301-387]
- Domain count: 2
- Matched identifier: HKOC_2470119
- Positioned domains: HisKA_3 194-259 ; HATPase_c 301-387
Cluster members and taxonomy
Representative gene: GCF_000399145#IIC_RS30050
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_018739645
AssemblyASM1873964v1 · Complete Genomehaploid
Genome composition5 798 832 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 118 · HK 64 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key