1 HisKA#1
124-170 aa · 47 aa · 14.4% of protein
Raw token
HisKA:124:0.00000821:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
JFU18_RS01830
Histidine kinase, Classic
Bacillus sp. TH22 · GCF_016651015
ClassHKTypeClassicLength327 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_016651015#JFU18_RS01830Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length327 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 327 aa (47.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa327 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 33.0% of protein
Raw token
HATPase_c:217:1.03e-26:324:108:109- Raw architecture: HisKA:124:0.00000821:170:53:64#HATPase_c:217:1.03e-26:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_016651015::NZ_JAEKER010000001.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span326470-328157Genomic interval covered by the local TCS group.
Identifiers
Old locus tagJFU18_01830RefSeq proteinWP_201033903.1
Context group ID
GCF_016651015::NZ_JAEKER010000001.1::G00004Context members
JFU18_RS01825JFU18_RS01830
Partner locus tags
JFU18_RS01825JFU18_RS01830
Partner old locus tags
JFU18_01825JFU18_01830
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_201033903.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagJFU18_RS01830Primary locus identifier stored in the genes table.
Old locus tagJFU18_01830Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAEKER010000001.1Sequence record reported by the local genomic context database.
Genomic interval327 174-328 157 nt984 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span326 470-328 157 ntGCF_016651015::NZ_JAEKER010000001.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_016651015::NZ_JAEKER010000001.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAEKER010000001.1All displayed genes belong to this local TCS context.
Neighborhood span326 470-328 157 nt1 688 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
326 470 nt328 157 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
JFU18_RS01825GCF_016651015#JFU18_RS01825
RROmpR
326 470-327 177 nt · Forward (+)
JFU18_RS01830GCF_016651015#JFU18_RS01830
HKClassicCurrent focus
327 174-328 157 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_016650995#JFU08_RS06360Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2862069
Simplified PFAM architecture for HKOC_2862069
PFAM domain coverage: 108 / 327 aa (33.0%)
1 aa327 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-324]
- Domain count: 1
- Matched identifier: HKOC_2862069
- Positioned domains: HATPase_c 217-324
Cluster members and taxonomy
Representative gene: GCF_016650995#JFU08_RS06360
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 796 388 · GCF_016651015
AssemblyASM1665101v1 · Contighaploid
Genome composition5 822 214 bp · 35,5% GCBacillus sp. TH22
Signal transduction countsGenes 116 · HK 62 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key