1 HisKA#1
124-170 aa · 47 aa · 14.3% of protein
Raw token
HisKA:124:0.0000103:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
JFU35_RS03155
Histidine kinase, Classic
Bacillus sp. TH45 · GCF_016650615
ClassHKTypeClassicLength329 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_016650615#JFU35_RS03155Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length329 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 329 aa (47.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa329 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 32.8% of protein
Raw token
HATPase_c:217:2.45e-27:324:108:109- Raw architecture: HisKA:124:0.0000103:170:53:64#HATPase_c:217:2.45e-27:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_016650615::NZ_JAEKFK010000005.1::G00008
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span103446-105139Genomic interval covered by the local TCS group.
Identifiers
Old locus tagJFU35_03155RefSeq proteinWP_201062839.1
Context group ID
GCF_016650615::NZ_JAEKFK010000005.1::G00008Context members
JFU35_RS03150JFU35_RS03155
Partner locus tags
JFU35_RS03150JFU35_RS03155
Partner old locus tags
JFU35_03150JFU35_03155
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_201062839.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagJFU35_RS03155Primary locus identifier stored in the genes table.
Old locus tagJFU35_03155Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAEKFK010000005.1Sequence record reported by the local genomic context database.
Genomic interval104 150-105 139 nt990 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span103 446-105 139 ntGCF_016650615::NZ_JAEKFK010000005.1::G00008
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_016650615::NZ_JAEKFK010000005.1::G00008Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAEKFK010000005.1All displayed genes belong to this local TCS context.
Neighborhood span103 446-105 139 nt1 694 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
103 446 nt105 139 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
JFU35_RS03150GCF_016650615#JFU35_RS03150
RROmpR
103 446-104 153 nt · Forward (+)
JFU35_RS03155GCF_016650615#JFU35_RS03155
HKClassicCurrent focus
104 150-105 139 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_016650615#JFU35_RS03155The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2858576
Simplified PFAM architecture for HKOC_2858576
PFAM domain coverage: 108 / 329 aa (32.8%)
1 aa329 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-324]
- Domain count: 1
- Matched identifier: HKOC_2858576
- Positioned domains: HATPase_c 217-324
Cluster members and taxonomy
Representative gene: GCF_016650615#JFU35_RS03155
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 796 409 · GCF_016650615
AssemblyASM1665061v1 · Contighaploid
Genome composition5 862 293 bp · 35,5% GCBacillus sp. TH45
Signal transduction countsGenes 105 · HK 56 · RR 49CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key