1 HisKA#1
19-81 aa · 63 aa · 27.6% of protein
Raw token
HisKA:19:0.0000000000106:81:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
FTO65_RS09610
Histidine kinase, Classic
Bacillus cereus · GCF_015069665
ClassHKTypeClassicLength228 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_015069665#FTO65_RS09610Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length228 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage167 / 228 aa (73.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa228 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
124-227 aa · 104 aa · 45.6% of protein
Raw token
HATPase_c:124:1.23e-23:227:107:109- Raw architecture: HisKA:19:0.0000000000106:81:63:64#HATPase_c:124:1.23e-23:227:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_015069665::NZ_VOUY01000003.1::G00049
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span1-688Genomic interval covered by the local TCS group.
Identifiers
Old locus tagFTO65_09710RefSeq proteinWP_193672239.1
Context group ID
GCF_015069665::NZ_VOUY01000003.1::G00049Context members
FTO65_RS09610
Partner locus tags
FTO65_RS09610
Partner old locus tags
FTO65_09710
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_193672239.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagFTO65_RS09610Primary locus identifier stored in the genes table.
Old locus tagFTO65_09710Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_VOUY01000003.1Sequence record reported by the local genomic context database.
Genomic interval1-688 nt688 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1-688 ntGCF_015069665::NZ_VOUY01000003.1::G00049
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_015069665::NZ_VOUY01000003.1::G00049Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_VOUY01000003.1All displayed genes belong to this local TCS context.
Neighborhood span1-688 nt688 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 nt688 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
FTO65_RS09610GCF_015069665#FTO65_RS09610
HKClassicCurrent focus
1-688 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015069665#FTO65_RS09610The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2926594
Simplified PFAM architecture for HKOC_2926594
PFAM domain coverage: 167 / 228 aa (73.2%)
1 aa228 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[19-81] | HATPase_c[124-227]
- Domain count: 2
- Matched identifier: HKOC_2926594
- Positioned domains: HisKA 19-81 ; HATPase_c 124-227
Cluster members and taxonomy
Representative gene: GCF_015069665#FTO65_RS09610
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_015069665
AssemblyASM1506966v1 · Contighaploid
Genome composition6 030 118 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 110 · HK 58 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key