1 HisKA#1
124-175 aa · 52 aa · 15.4% of protein
Raw token
HisKA:124:0.0000465:175:58:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
H8S76_RS06045
Histidine kinase, Classic
Blautia celeris · GCF_014287615
ClassHKTypeClassicLength338 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_014287615#H8S76_RS06045Stable P2CS identifier used across views.
GenomeGCF_014287615Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length338 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage164 / 338 aa (48.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa338 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
220-331 aa · 112 aa · 33.1% of protein
Raw token
HATPase_c:220:4.17e-22:331:112:109- Raw architecture: HisKA:124:0.0000465:175:58:64#HATPase_c:220:4.17e-22:331:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_014287615::NZ_JACOOU010000002.1::G00041
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span310300-311978Genomic interval covered by the local TCS group.
Identifiers
Old locus tagH8S76_06045RefSeq proteinWP_103731695.1
Context group ID
GCF_014287615::NZ_JACOOU010000002.1::G00041Context members
H8S76_RS06040H8S76_RS06045
Partner locus tags
H8S76_RS06040H8S76_RS06045
Partner old locus tags
H8S76_06040H8S76_06045
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_103731695.1Primary protein accession used for annex mappings.
UniProt accessionA0ABR7F9A1Primary UniProt accession resolved in the annex database.
UniProt IDA0ABR7F9A1_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagH8S76_RS06045Primary locus identifier stored in the genes table.
Old locus tagH8S76_06045Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JACOOU010000002.1Sequence record reported by the local genomic context database.
Genomic interval310 962-311 978 nt1 017 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span310 300-311 978 ntGCF_014287615::NZ_JACOOU010000002.1::G00041
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_014287615::NZ_JACOOU010000002.1::G00041Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JACOOU010000002.1All displayed genes belong to this local TCS context.
Neighborhood span310 300-311 978 nt1 679 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
310 300 nt311 978 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
H8S76_RS06040GCF_014287615#H8S76_RS06040
RROmpR
310 300-310 965 nt · Forward (+)
H8S76_RS06045GCF_014287615#H8S76_RS06045
HKClassicCurrent focus
310 962-311 978 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003478165#DXA40_RS01455Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2842577
Simplified PFAM architecture for HKOC_2842577
PFAM domain coverage: 112 / 338 aa (33.1%)
1 aa338 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[221-332]
- Domain count: 1
- Matched identifier: HKOC_2842577
- Positioned domains: HATPase_c 221-332
Cluster members and taxonomy
Representative gene: GCF_003478165#DXA40_RS01455
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 763 026 · GCF_014287615
AssemblyASM1428761v1 · Contigreference genome · haploid
Genome composition6 189 697 bp · 46,5% GCBlautia celeris
Signal transduction countsGenes 263 · HK 136 · RR 124CheA 1 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key