1 HisKA#1
344-410 aa · 67 aa · 9.2% of protein
Raw token
HisKA:344:7.82e-18:410:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
H8S76_RS03535
Histidine kinase, Hybrid
Blautia celeris · GCF_014287615
ClassHKTypeHybridLength729 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_014287615#H8S76_RS03535Stable P2CS identifier used across views.
GenomeGCF_014287615Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length729 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage303 / 729 aa (41.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa729 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
457-575 aa · 119 aa · 16.3% of protein
Raw token
HATPase_c:457:6.59e-32:575:119:1093 Response_reg#3
609-725 aa · 117 aa · 16.0% of protein
Raw token
Response_reg:609:1.29e-28:725:117:111- Raw architecture: HisKA:344:7.82e-18:410:67:64#HATPase_c:457:6.59e-32:575:119:109#Response_reg:609:1.29e-28:725:117:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_014287615::NZ_JACOOU010000001.1::G00023
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span785532-787721Genomic interval covered by the local TCS group.
Identifiers
Old locus tagH8S76_03535RefSeq proteinWP_186970995.1
Context group ID
GCF_014287615::NZ_JACOOU010000001.1::G00023Context members
H8S76_RS03535
Partner locus tags
H8S76_RS03535
Partner old locus tags
H8S76_03535
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_186970995.1Primary protein accession used for annex mappings.
UniProt accessionA0ABR7F7X0Primary UniProt accession resolved in the annex database.
UniProt IDA0ABR7F7X0_9FIRMDisplay identifier provided by UniProt.
GO / PubMed0 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagH8S76_RS03535Primary locus identifier stored in the genes table.
Old locus tagH8S76_03535Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JACOOU010000001.1Sequence record reported by the local genomic context database.
Genomic interval785 532-787 721 nt2 190 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span785 532-787 721 ntGCF_014287615::NZ_JACOOU010000001.1::G00023
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_014287615::NZ_JACOOU010000001.1::G00023Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JACOOU010000001.1All displayed genes belong to this local TCS context.
Neighborhood span785 532-787 721 nt2 190 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
785 532 nt787 721 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
H8S76_RS03535GCF_014287615#H8S76_RS03535
HKHybridCurrent focus
785 532-787 721 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_014287615#H8S76_RS03535The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0715159
Simplified PFAM architecture for HKOC_0715159
PFAM domain coverage: 300 / 729 aa (41.2%)
1 aa729 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[345-410] | HATPase_c[457-574] | Response_reg[609-724]
- Domain count: 3
- Matched identifier: HKOC_0715159
- Positioned domains: HisKA 345-410 ; HATPase_c 457-574 ; Response_reg 609-724
Cluster members and taxonomy
Representative gene: GCF_014287615#H8S76_RS03535
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 763 026 · GCF_014287615
AssemblyASM1428761v1 · Contigreference genome · haploid
Genome composition6 189 697 bp · 46,5% GCBlautia celeris
Signal transduction countsGenes 263 · HK 136 · RR 124CheA 1 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key