1 HisKA_3#1
169-232 aa · 64 aa · 17.7% of protein
Raw token
HisKA_3:169:0.0000000000000186:232:65:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
H8S76_RS03010
Histidine kinase, Classic
Blautia celeris · GCF_014287615
ClassHKTypeClassicLength361 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_014287615#H8S76_RS03010Stable P2CS identifier used across views.
GenomeGCF_014287615Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length361 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 361 aa (40.2%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa361 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
273-353 aa · 81 aa · 22.4% of protein
Raw token
HATPase_c:273:0.000000000606:353:100:109- Raw architecture: HisKA_3:169:0.0000000000000186:232:65:68#HATPase_c:273:0.000000000606:353:100:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_014287615::NZ_JACOOU010000001.1::G00019
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span684994-686716Genomic interval covered by the local TCS group.
Identifiers
Old locus tagH8S76_03010RefSeq proteinWP_186970970.1
Context group ID
GCF_014287615::NZ_JACOOU010000001.1::G00019Context members
H8S76_RS03010H8S76_RS03015
Partner locus tags
H8S76_RS03010H8S76_RS03015
Partner old locus tags
H8S76_03010H8S76_03015
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_186970970.1Primary protein accession used for annex mappings.
UniProt accessionA0ABR7F7L5Primary UniProt accession resolved in the annex database.
UniProt IDA0ABR7F7L5_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagH8S76_RS03010Primary locus identifier stored in the genes table.
Old locus tagH8S76_03010Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JACOOU010000001.1Sequence record reported by the local genomic context database.
Genomic interval684 994-686 079 nt1 086 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span684 994-686 716 ntGCF_014287615::NZ_JACOOU010000001.1::G00019
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_014287615::NZ_JACOOU010000001.1::G00019Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JACOOU010000001.1All displayed genes belong to this local TCS context.
Neighborhood span684 994-686 716 nt1 723 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
684 994 nt686 716 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
H8S76_RS03010GCF_014287615#H8S76_RS03010
HKClassicCurrent focus
684 994-686 079 nt · Forward (+)
H8S76_RS03015GCF_014287615#H8S76_RS03015
RRNarL
686 090-686 716 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_014287615#H8S76_RS03010The current gene is the representative for this cluster.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2743052
Simplified PFAM architecture for HKOC_2743052
PFAM domain coverage: 65 / 361 aa (18.0%)
1 aa361 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[169-233]
- Domain count: 1
- Matched identifier: HKOC_2743052
- Positioned domains: HisKA_3 169-233
Cluster members and taxonomy
Representative gene: GCF_014287615#H8S76_RS03010
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 763 026 · GCF_014287615
AssemblyASM1428761v1 · Contigreference genome · haploid
Genome composition6 189 697 bp · 46,5% GCBlautia celeris
Signal transduction countsGenes 263 · HK 136 · RR 124CheA 1 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key