1 Response_reg#1
6-118 aa · 113 aa · 30.9% of protein
Raw token
Response_reg:6:2.02e-32:118:113:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
H8S76_RS02980
Histidine kinase, Hybrid
Blautia celeris · GCF_014287615
ClassHKTypeHybridLength366 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_014287615#H8S76_RS02980Stable P2CS identifier used across views.
GenomeGCF_014287615Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
Response_regHisKAHATPase_c
Protein length366 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage290 / 366 aa (79.2%)Merged over positioned domains only.
Domain description1 Response_reg,1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa366 aa
Domain-by-domain annotation3 items
2 HisKA#2
136-200 aa · 65 aa · 17.8% of protein
Raw token
HisKA:136:0.000000567:200:65:643 HATPase_c#3
245-356 aa · 112 aa · 30.6% of protein
Raw token
HATPase_c:245:5.16e-25:356:112:109- Raw architecture: Response_reg:6:2.02e-32:118:113:111#HisKA:136:0.000000567:200:65:64#HATPase_c:245:5.16e-25:356:112:109
- Domain description: 1 Response_reg,1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_014287615::NZ_JACOOU010000001.1::G00018
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span678803-679903Genomic interval covered by the local TCS group.
Identifiers
Old locus tagH8S76_02980RefSeq proteinWP_186970967.1
Context group ID
GCF_014287615::NZ_JACOOU010000001.1::G00018Context members
H8S76_RS02980
Partner locus tags
H8S76_RS02980
Partner old locus tags
H8S76_02980
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_186970967.1Primary protein accession used for annex mappings.
UniProt accessionA0ABR7F7P2Primary UniProt accession resolved in the annex database.
UniProt IDA0ABR7F7P2_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagH8S76_RS02980Primary locus identifier stored in the genes table.
Old locus tagH8S76_02980Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JACOOU010000001.1Sequence record reported by the local genomic context database.
Genomic interval678 803-679 903 nt1 101 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span678 803-679 903 ntGCF_014287615::NZ_JACOOU010000001.1::G00018
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_014287615::NZ_JACOOU010000001.1::G00018Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JACOOU010000001.1All displayed genes belong to this local TCS context.
Neighborhood span678 803-679 903 nt1 101 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
678 803 nt679 903 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
H8S76_RS02980GCF_014287615#H8S76_RS02980
HKHybridCurrent focus
678 803-679 903 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_014287615#H8S76_RS02980The current gene is the representative for this cluster.
PFAM architectureResponse_reg + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2714567
Simplified PFAM architecture for HKOC_2714567
PFAM domain coverage: 289 / 366 aa (79.0%)
1 aa366 aa
Response_regHisKAHATPase_c
- Simplified architecture: Response_reg + HisKA + HATPase_c
- Raw architecture: Response_reg[6-118] | HisKA[137-201] | HATPase_c[246-356]
- Domain count: 3
- Matched identifier: HKOC_2714567
- Positioned domains: Response_reg 6-118 ; HisKA 137-201 ; HATPase_c 246-356
Cluster members and taxonomy
Representative gene: GCF_014287615#H8S76_RS02980
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 763 026 · GCF_014287615
AssemblyASM1428761v1 · Contigreference genome · haploid
Genome composition6 189 697 bp · 46,5% GCBlautia celeris
Signal transduction countsGenes 263 · HK 136 · RR 124CheA 1 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key