1 Response_reg#1
48-107 aa · 60 aa · 52.6% of protein
Raw token
Response_reg:48:0.0000369:107:62:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
G4449_RS16620
Response regulator, CheY family
Blautia wexlerae · GCF_013301765
ClassRRTypeCheYLength114 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_013301765#G4449_RS16620Stable P2CS identifier used across views.
GenomeGCF_013301765Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
Response_reg
Protein length114 aaLength used to scale native and Biotite-like views.
Annotated domains11 with usable coordinates.
Domain coverage60 / 114 aa (52.6%)Merged over positioned domains only.
Domain description1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa114 aa
Domain-by-domain annotation1 item
- Raw architecture: Response_reg:48:0.0000369:107:62:111
- Domain description: 1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_013301765::NZ_JAAIOY010000076.1::G00060
Group size22 locus tags listed below.
HK / RR0 / 2Counts resolved for the local TCS neighborhood.
Context span9085-10275Genomic interval covered by the local TCS group.
Identifiers
Old locus tagG4449_16675RefSeq proteinWP_118521968.1
Context group ID
GCF_013301765::NZ_JAAIOY010000076.1::G00060Context members
G4449_RS16620G4449_RS16625
Partner locus tags
G4449_RS16620G4449_RS16625
Partner old locus tags
G4449_16675G4449_16680
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_118521968.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagG4449_RS16620Primary locus identifier stored in the genes table.
Old locus tagG4449_16675Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAAIOY010000076.1Sequence record reported by the local genomic context database.
Genomic interval9 085-9 429 nt345 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span9 085-10 275 ntGCF_013301765::NZ_JAAIOY010000076.1::G00060
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_013301765::NZ_JAAIOY010000076.1::G00060Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAAIOY010000076.1All displayed genes belong to this local TCS context.
Neighborhood span9 085-10 275 nt1 191 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
9 085 nt10 275 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
G4449_RS16620GCF_013301765#G4449_RS16620
RRCheYCurrent focus
9 085-9 429 nt · Forward (+)
G4449_RS16625GCF_013301765#G4449_RS16625
RRLytTR
9 541-10 275 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_013299815#G4455_RS16565Use this link to inspect the representative gene detail.
PFAM architectureNo PFAM architecture availablePFAM architecture is attached when the local PFAM databases provide a match.
PFAM architecture for RROC_2466723
No PFAM cluster architecture is available for the current selection on this server.
Cluster members and taxonomy
Representative gene: GCF_013299815#G4455_RS16565
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_013301765
AssemblyASM1330176v1 · Contighaploid
Genome composition4 097 873 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 125 · HK 62 · RR 62CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key