1 Response_reg#1
15-99 aa · 85 aa · 65.4% of protein
Raw token
Response_reg:15:0.00000118:99:87:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
G5A95_RS07635
Response regulator, CheY family
Fusicatenibacter saccharivorans · GCF_013300205
ClassRRTypeCheYLength130 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_013300205#G5A95_RS07635Stable P2CS identifier used across views.
GenomeGCF_013300205Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Fusicatenibacter
Domain signature
Compact overview inferred from the domain field
Response_reg
Protein length130 aaLength used to scale native and Biotite-like views.
Annotated domains11 with usable coordinates.
Domain coverage85 / 130 aa (65.4%)Merged over positioned domains only.
Domain description1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa130 aa
Domain-by-domain annotation1 item
- Raw architecture: Response_reg:15:0.00000118:99:87:111
- Domain description: 1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_013300205::NZ_JAAIUE010000008.1::G00055
Group size11 locus tag listed below.
HK / RR0 / 1Counts resolved for the local TCS neighborhood.
Context span68799-69191Genomic interval covered by the local TCS group.
Identifiers
Old locus tagG5A95_07660RefSeq proteinWP_118594838.1
Context group ID
GCF_013300205::NZ_JAAIUE010000008.1::G00055Context members
G5A95_RS07635
Partner locus tags
G5A95_RS07635
Partner old locus tags
G5A95_07660
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_118594838.1Primary protein accession used for annex mappings.
UniProt accessionA0AAE3JVX1Primary UniProt accession resolved in the annex database.
UniProt IDA0AAE3JVX1_9FIRMDisplay identifier provided by UniProt.
GO / PubMed0 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagG5A95_RS07635Primary locus identifier stored in the genes table.
Old locus tagG5A95_07660Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAAIUE010000008.1Sequence record reported by the local genomic context database.
Genomic interval68 799-69 191 nt393 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span68 799-69 191 ntGCF_013300205::NZ_JAAIUE010000008.1::G00055
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_013300205::NZ_JAAIUE010000008.1::G00055Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAAIUE010000008.1All displayed genes belong to this local TCS context.
Neighborhood span68 799-69 191 nt393 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
68 799 nt69 191 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
G5A95_RS07635GCF_013300205#G5A95_RS07635
RRCheYCurrent focus
68 799-69 191 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003479185#DWX00_RS06000Use this link to inspect the representative gene detail.
PFAM architectureNo PFAM architecture availablePFAM architecture is attached when the local PFAM databases provide a match.
PFAM architecture for RROC_2323629
No PFAM cluster architecture is available for the current selection on this server.
Cluster members and taxonomy
Representative gene: GCF_003479185#DWX00_RS06000
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 150 298 · GCF_013300205
AssemblyASM1330020v1 · Contighaploid
Genome composition3 543 439 bp · 47,5% GCFusicatenibacter saccharivorans
Signal transduction countsGenes 96 · HK 49 · RR 45CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusFusicatenibacter
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Fusicatenibacter
Related genes
Preview from the same derived genome key