1 HisKA#1
528-594 aa · 67 aa · 7.4% of protein
Raw token
HisKA:528:0.00000000000000296:594:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
GT686_RS00325
Histidine kinase, Hybrid
Blautia wexlerae · GCF_009881345
ClassHKTypeHybridLength902 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_009881345#GT686_RS00325Stable P2CS identifier used across views.
GenomeGCF_009881345Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length902 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage303 / 902 aa (33.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa902 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
643-760 aa · 118 aa · 13.1% of protein
Raw token
HATPase_c:643:1.23e-26:760:118:1093 Response_reg#3
782-899 aa · 118 aa · 13.1% of protein
Raw token
Response_reg:782:1.73e-32:899:118:111- Raw architecture: HisKA:528:0.00000000000000296:594:67:64#HATPase_c:643:1.23e-26:760:118:109#Response_reg:782:1.73e-32:899:118:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_009881345::NZ_WWVC01000001.1::G00025
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span65935-68643Genomic interval covered by the local TCS group.
Identifiers
Old locus tagGT686_00325RefSeq proteinWP_161275813.1
Context group ID
GCF_009881345::NZ_WWVC01000001.1::G00025Context members
GT686_RS00325
Partner locus tags
GT686_RS00325
Partner old locus tags
GT686_00325
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_161275813.1Primary protein accession used for annex mappings.
UniProt accessionA0A6L8XNL7Primary UniProt accession resolved in the annex database.
UniProt IDA0A6L8XNL7_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagGT686_RS00325Primary locus identifier stored in the genes table.
Old locus tagGT686_00325Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_WWVC01000001.1Sequence record reported by the local genomic context database.
Genomic interval65 935-68 643 nt2 709 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span65 935-68 643 ntGCF_009881345::NZ_WWVC01000001.1::G00025
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_009881345::NZ_WWVC01000001.1::G00025Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_WWVC01000001.1All displayed genes belong to this local TCS context.
Neighborhood span65 935-68 643 nt2 709 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
65 935 nt68 643 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
GT686_RS00325GCF_009881345#GT686_RS00325
HKHybridCurrent focus
65 935-68 643 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009881235#GT685_RS00365Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0403284
Simplified PFAM architecture for HKOC_0403284
PFAM domain coverage: 299 / 902 aa (33.1%)
1 aa902 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[529-594] | HATPase_c[644-759] | Response_reg[782-898]
- Domain count: 3
- Matched identifier: HKOC_0403284
- Positioned domains: HisKA 529-594 ; HATPase_c 644-759 ; Response_reg 782-898
Cluster members and taxonomy
Representative gene: GCF_009881235#GT685_RS00365
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_009881345
AssemblyASM988134v1 · Scaffoldhaploid
Genome composition4 246 860 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 137 · HK 66 · RR 69CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key