1 HisKA#1
204-267 aa · 64 aa · 15.1% of protein
Raw token
HisKA:204:0.0000000000000108:267:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
GT685_RS05795
Histidine kinase, Classic
Blautia wexlerae · GCF_009881235
ClassHKTypeClassicLength425 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_009881235#GT685_RS05795Stable P2CS identifier used across views.
GenomeGCF_009881235Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length425 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage174 / 425 aa (40.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa425 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
316-425 aa · 110 aa · 25.9% of protein
Raw token
HATPase_c:316:4.12e-28:425:110:109- Raw architecture: HisKA:204:0.0000000000000108:267:64:64#HATPase_c:316:4.12e-28:425:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_009881235::NZ_WWUZ01000008.1::G00080
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span39263-40540Genomic interval covered by the local TCS group.
Identifiers
Old locus tagGT685_05825RefSeq proteinWP_161276106.1
Context group ID
GCF_009881235::NZ_WWUZ01000008.1::G00080Context members
GT685_RS05795
Partner locus tags
GT685_RS05795
Partner old locus tags
GT685_05825
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_161276106.1Primary protein accession used for annex mappings.
UniProt accessionA0A6L8XRR3Primary UniProt accession resolved in the annex database.
UniProt IDA0A6L8XRR3_9FIRMDisplay identifier provided by UniProt.
GO / PubMed2 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagGT685_RS05795Primary locus identifier stored in the genes table.
Old locus tagGT685_05825Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_WWUZ01000008.1Sequence record reported by the local genomic context database.
Genomic interval39 263-40 540 nt1 278 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span39 263-40 540 ntGCF_009881235::NZ_WWUZ01000008.1::G00080
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_009881235::NZ_WWUZ01000008.1::G00080Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_WWUZ01000008.1All displayed genes belong to this local TCS context.
Neighborhood span39 263-40 540 nt1 278 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
39 263 nt40 540 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
GT685_RS05795GCF_009881235#GT685_RS05795
HKClassicCurrent focus
39 263-40 540 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009881235#GT685_RS05795The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2218512
Simplified PFAM architecture for HKOC_2218512
PFAM domain coverage: 172 / 425 aa (40.5%)
1 aa425 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[205-267] | HATPase_c[316-424]
- Domain count: 2
- Matched identifier: HKOC_2218512
- Positioned domains: HisKA 205-267 ; HATPase_c 316-424
Cluster members and taxonomy
Representative gene: GCF_009881235#GT685_RS05795
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_009881235
AssemblyASM988123v1 · Scaffoldhaploid
Genome composition4 251 753 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 140 · HK 66 · RR 72CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key