1 HisKA#1
139-203 aa · 65 aa · 17.6% of protein
Raw token
HisKA:139:0.000000000000879:203:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXA93_RS10470
Histidine kinase, Classic
Blautia sp. OF09-25XD · GCF_003482095
ClassHKTypeClassicLength370 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003482095#DXA93_RS10470Stable P2CS identifier used across views.
GenomeGCF_003482095Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length370 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage174 / 370 aa (47.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa370 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
249-357 aa · 109 aa · 29.5% of protein
Raw token
HATPase_c:249:0.00000000000307:357:113:109- Raw architecture: HisKA:139:0.000000000000879:203:65:64#HATPase_c:249:0.00000000000307:357:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003482095::NZ_QUMG01000011.1::G00009
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span74976-76088Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXA93_10465RefSeq proteinWP_147399547.1
Context group ID
GCF_003482095::NZ_QUMG01000011.1::G00009Context members
DXA93_RS10470
Partner locus tags
DXA93_RS10470
Partner old locus tags
DXA93_10465
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_147399547.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXA93_RS10470Primary locus identifier stored in the genes table.
Old locus tagDXA93_10465Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUMG01000011.1Sequence record reported by the local genomic context database.
Genomic interval74 976-76 088 nt1 113 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span74 976-76 088 ntGCF_003482095::NZ_QUMG01000011.1::G00009
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003482095::NZ_QUMG01000011.1::G00009Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUMG01000011.1All displayed genes belong to this local TCS context.
Neighborhood span74 976-76 088 nt1 113 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
74 976 nt76 088 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DXA93_RS10470GCF_003482095#DXA93_RS10470
HKClassicCurrent focus
74 976-76 088 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003482095#DXA93_RS10470The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2684242
Simplified PFAM architecture for HKOC_2684242
PFAM domain coverage: 171 / 370 aa (46.2%)
1 aa370 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[140-203] | HATPase_c[249-355]
- Domain count: 2
- Matched identifier: HKOC_2684242
- Positioned domains: HisKA 140-203 ; HATPase_c 249-355
Cluster members and taxonomy
Representative gene: GCF_003482095#DXA93_RS10470
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 981 · GCF_003482095
AssemblyASM348209v1 · Contighaploid
Genome composition3 679 129 bp · 47,0% GCBlautia sp. OF09-25XD
Signal transduction countsGenes 81 · HK 41 · RR 37CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key