1 HisKA#1
85-146 aa · 62 aa · 20.5% of protein
Raw token
HisKA:85:0.0000000000189:146:62:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXD02_RS10105
Histidine kinase, Classic
Blautia sp. TF10-30 · GCF_003481245
ClassHKTypeClassicLength302 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003481245#DXD02_RS10105Stable P2CS identifier used across views.
GenomeGCF_003481245Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length302 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage169 / 302 aa (56.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa302 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
191-297 aa · 107 aa · 35.4% of protein
Raw token
HATPase_c:191:1.44e-27:297:107:109- Raw architecture: HisKA:85:0.0000000000189:146:62:64#HATPase_c:191:1.44e-27:297:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003481245::NZ_QUKM01000010.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1991-3579Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXD02_10125RefSeq proteinWP_118666806.1
Context group ID
GCF_003481245::NZ_QUKM01000010.1::G00004Context members
DXD02_RS10100DXD02_RS10105
Partner locus tags
DXD02_RS10100DXD02_RS10105
Partner old locus tags
DXD02_10120DXD02_10125
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_118666806.1Primary protein accession used for annex mappings.
UniProt accessionA0AAE3F3R3Primary UniProt accession resolved in the annex database.
UniProt IDA0AAE3F3R3_9FIRMDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXD02_RS10105Primary locus identifier stored in the genes table.
Old locus tagDXD02_10125Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUKM01000010.1Sequence record reported by the local genomic context database.
Genomic interval2 671-3 579 nt909 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 991-3 579 ntGCF_003481245::NZ_QUKM01000010.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003481245::NZ_QUKM01000010.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUKM01000010.1All displayed genes belong to this local TCS context.
Neighborhood span1 991-3 579 nt1 589 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 991 nt3 579 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DXD02_RS10100GCF_003481245#DXD02_RS10100
RROmpR
1 991-2 674 nt · Forward (+)
DXD02_RS10105GCF_003481245#DXD02_RS10105
HKClassicCurrent focus
2 671-3 579 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003481175#DXD26_RS12870Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2884946
Simplified PFAM architecture for HKOC_2884946
PFAM domain coverage: 170 / 302 aa (56.3%)
1 aa302 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[85-146] | HATPase_c[191-298]
- Domain count: 2
- Matched identifier: HKOC_2884946
- Positioned domains: HisKA 85-146 ; HATPase_c 191-298
Cluster members and taxonomy
Representative gene: GCF_003481175#DXD26_RS12870
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 986 · GCF_003481245
AssemblyASM348124v1 · Scaffoldhaploid
Genome composition3 331 719 bp · 47,5% GCBlautia sp. TF10-30
Signal transduction countsGenes 82 · HK 42 · RR 38CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key