1 HisKA#1
265-331 aa · 67 aa · 12.8% of protein
Raw token
HisKA:265:2.3e-18:331:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXD21_RS14610
Histidine kinase, Classic
Blautia sp. TF12-12AT · GCF_003481205
ClassHKTypeClassicLength523 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003481205#DXD21_RS14610Stable P2CS identifier used across views.
GenomeGCF_003481205Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length523 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage179 / 523 aa (34.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa523 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
384-495 aa · 112 aa · 21.4% of protein
Raw token
HATPase_c:384:4.55e-29:495:112:109- Raw architecture: HisKA:265:2.3e-18:331:67:64#HATPase_c:384:4.55e-29:495:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003481205::NZ_QUKG01000030.1::G00032
Group size22 locus tags listed below.
HK / RR2 / 0Counts resolved for the local TCS neighborhood.
Context span96-4902Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXD21_14625RefSeq proteinWP_243106620.1
Context group ID
GCF_003481205::NZ_QUKG01000030.1::G00032Context members
DXD21_RS14610DXD21_RS14620
Partner locus tags
DXD21_RS14610DXD21_RS14620
Partner old locus tags
DXD21_14625DXD21_14635
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_243106620.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXD21_RS14610Primary locus identifier stored in the genes table.
Old locus tagDXD21_14625Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUKG01000030.1Sequence record reported by the local genomic context database.
Genomic interval96-1 667 nt1 572 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span96-4 902 ntGCF_003481205::NZ_QUKG01000030.1::G00032
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003481205::NZ_QUKG01000030.1::G00032Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUKG01000030.1All displayed genes belong to this local TCS context.
Neighborhood span96-4 902 nt4 807 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
96 nt4 902 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DXD21_RS14610GCF_003481205#DXD21_RS14610
HKClassicCurrent focus
96-1 667 nt · Reverse (-)
DXD21_RS14620GCF_003481205#DXD21_RS14620
HKHybrid
2 029-4 902 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003481175#DXD26_RS14440Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1380934
Simplified PFAM architecture for HKOC_1380934
PFAM domain coverage: 180 / 523 aa (34.4%)
1 aa523 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[265-330] | HATPase_c[381-494]
- Domain count: 2
- Matched identifier: HKOC_1380934
- Positioned domains: HisKA 265-330 ; HATPase_c 381-494
Cluster members and taxonomy
Representative gene: GCF_003481175#DXD26_RS14440
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 988 · GCF_003481205
AssemblyASM348120v1 · Contighaploid
Genome composition3 327 287 bp · 47,5% GCBlautia sp. TF12-12AT
Signal transduction countsGenes 78 · HK 38 · RR 37CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key