1 HisKA#1
186-252 aa · 67 aa · 11.5% of protein
Raw token
HisKA:186:2.48e-17:252:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXD21_RS07575
Histidine kinase, Hybrid
Blautia sp. TF12-12AT · GCF_003481205
ClassHKTypeHybridLength582 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003481205#DXD21_RS07575Stable P2CS identifier used across views.
GenomeGCF_003481205Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length582 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage303 / 582 aa (52.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa582 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
299-417 aa · 119 aa · 20.4% of protein
Raw token
HATPase_c:299:7.63e-29:417:119:1093 Response_reg#3
445-561 aa · 117 aa · 20.1% of protein
Raw token
Response_reg:445:2.8e-27:561:117:111- Raw architecture: HisKA:186:2.48e-17:252:67:64#HATPase_c:299:7.63e-29:417:119:109#Response_reg:445:2.8e-27:561:117:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003481205::NZ_QUKG01000008.1::G00045
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span95879-97627Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXD21_07595RefSeq proteinWP_243108207.1
Context group ID
GCF_003481205::NZ_QUKG01000008.1::G00045Context members
DXD21_RS07575
Partner locus tags
DXD21_RS07575
Partner old locus tags
DXD21_07595
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_243108207.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXD21_RS07575Primary locus identifier stored in the genes table.
Old locus tagDXD21_07595Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUKG01000008.1Sequence record reported by the local genomic context database.
Genomic interval95 879-97 627 nt1 749 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span95 879-97 627 ntGCF_003481205::NZ_QUKG01000008.1::G00045
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003481205::NZ_QUKG01000008.1::G00045Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUKG01000008.1All displayed genes belong to this local TCS context.
Neighborhood span95 879-97 627 nt1 749 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
95 879 nt97 627 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DXD21_RS07575GCF_003481205#DXD21_RS07575
HKHybridCurrent focus
95 879-97 627 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003481175#DXD26_RS05520Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0622262
Simplified PFAM architecture for HKOC_0622262
PFAM domain coverage: 301 / 769 aa (39.1%)
1 aa769 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[373-439] | HATPase_c[486-603] | Response_reg[632-747]
- Domain count: 3
- Matched identifier: HKOC_0622262
- Positioned domains: HisKA 373-439 ; HATPase_c 486-603 ; Response_reg 632-747
Cluster members and taxonomy
Representative gene: GCF_003481175#DXD26_RS05520
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 988 · GCF_003481205
AssemblyASM348120v1 · Contighaploid
Genome composition3 327 287 bp · 47,5% GCBlautia sp. TF12-12AT
Signal transduction countsGenes 78 · HK 38 · RR 37CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key