1 His_kinase#1
355-428 aa · 74 aa · 13.1% of protein
Raw token
His_kinase:355:2.26e-19:428:74:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW743_RS00505
Histidine kinase, Classic
Blautia sp. AM28-27 · GCF_003480905
ClassHKTypeClassicLength565 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003480905#DW743_RS00505Stable P2CS identifier used across views.
GenomeGCF_003480905Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length565 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage182 / 565 aa (32.2%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa565 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
451-558 aa · 108 aa · 19.1% of protein
Raw token
HATPase_c:451:0.000000108:558:114:109- Raw architecture: His_kinase:355:2.26e-19:428:74:80#HATPase_c:451:0.000000108:558:114:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003480905::NZ_QUJK01000001.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span116367-119347Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW743_00505RefSeq proteinWP_158565041.1
Context group ID
GCF_003480905::NZ_QUJK01000001.1::G00001Context members
DW743_RS00505DW743_RS00510
Partner locus tags
DW743_RS00505DW743_RS00510
Partner old locus tags
DW743_00505DW743_00510
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_158565041.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW743_RS00505Primary locus identifier stored in the genes table.
Old locus tagDW743_00505Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUJK01000001.1Sequence record reported by the local genomic context database.
Genomic interval116 367-118 064 nt1 698 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span116 367-119 347 ntGCF_003480905::NZ_QUJK01000001.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003480905::NZ_QUJK01000001.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUJK01000001.1All displayed genes belong to this local TCS context.
Neighborhood span116 367-119 347 nt2 981 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
116 367 nt119 347 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DW743_RS00505GCF_003480905#DW743_RS00505
HKClassicCurrent focus
116 367-118 064 nt · Forward (+)
DW743_RS00510GCF_003480905#DW743_RS00510
RRunclassified
118 061-119 347 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003460685#DXA55_RS05745Use this link to inspect the representative gene detail.
PFAM architectureHis_kinase + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1235619
Simplified PFAM architecture for HKOC_1235619
PFAM domain coverage: 176 / 565 aa (31.2%)
1 aa565 aa
His_kinaseHATPase_c
- Simplified architecture: His_kinase + HATPase_c
- Raw architecture: His_kinase[355-429] | HATPase_c[453-553]
- Domain count: 2
- Matched identifier: HKOC_1235619
- Positioned domains: His_kinase 355-429 ; HATPase_c 453-553
Cluster members and taxonomy
Representative gene: GCF_003460685#DXA55_RS05745
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 973 · GCF_003480905
AssemblyASM348090v1 · Scaffoldhaploid
Genome composition3 808 541 bp · 47,0% GCBlautia sp. AM28-27
Signal transduction countsGenes 102 · HK 51 · RR 49CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key