1 His_kinase#1
60-139 aa · 80 aa · 29.4% of protein
Raw token
His_kinase:60:1.57e-32:139:80:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW806_RS10915
Histidine kinase, Classic
Butyricicoccus sp. AM32-19 · GCF_003480365
ClassHKTypeClassicLength272 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003480365#DW806_RS10915Stable P2CS identifier used across views.
GenomeGCF_003480365Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Butyricicoccaceae; Butyricicoccus
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length272 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage191 / 272 aa (70.2%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa272 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
157-267 aa · 111 aa · 40.8% of protein
Raw token
HATPase_c:157:9.17e-17:267:111:109- Raw architecture: His_kinase:60:1.57e-32:139:80:80#HATPase_c:157:9.17e-17:267:111:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003480365::NZ_QUIX01000013.1::G00011
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span41657-44068Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW806_10910RefSeq proteinWP_118360885.1
Context group ID
GCF_003480365::NZ_QUIX01000013.1::G00011Context members
DW806_RS10915DW806_RS10920
Partner locus tags
DW806_RS10915DW806_RS10920
Partner old locus tags
DW806_10910DW806_10915
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_118360885.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW806_RS10915Primary locus identifier stored in the genes table.
Old locus tagDW806_10910Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUIX01000013.1Sequence record reported by the local genomic context database.
Genomic interval41 657-42 475 nt819 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span41 657-44 068 ntGCF_003480365::NZ_QUIX01000013.1::G00011
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003480365::NZ_QUIX01000013.1::G00011Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUIX01000013.1All displayed genes belong to this local TCS context.
Neighborhood span41 657-44 068 nt2 412 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
41 657 nt44 068 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DW806_RS10915GCF_003480365#DW806_RS10915
HKClassicCurrent focus
41 657-42 475 nt · Reverse (-)
DW806_RS10920GCF_003480365#DW806_RS10920
RRunclassified
42 485-44 068 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003474415#DW088_RS11915Use this link to inspect the representative gene detail.
PFAM architectureHis_kinase + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2906360
Simplified PFAM architecture for HKOC_2906360
PFAM domain coverage: 191 / 272 aa (70.2%)
1 aa272 aa
His_kinaseHATPase_c
- Simplified architecture: His_kinase + HATPase_c
- Raw architecture: His_kinase[60-139] | HATPase_c[157-267]
- Domain count: 2
- Matched identifier: HKOC_2906360
- Positioned domains: His_kinase 60-139 ; HATPase_c 157-267
Cluster members and taxonomy
Representative gene: GCF_003474415#DW088_RS11915
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 296 · GCF_003480365
AssemblyASM348036v1 · Scaffoldhaploid
Genome composition3 041 364 bp · 54,5% GCButyricicoccus sp. AM32-19
Signal transduction countsGenes 72 · HK 33 · RR 37CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyButyricicoccaceaeGenusButyricicoccus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Butyricicoccaceae7Butyricicoccus
Related genes
Preview from the same derived genome key