1 HisKA#1
33-88 aa · 56 aa · 23.2% of protein
Raw token
HisKA:33:0.000000152:88:56:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXA40_RS07185
Histidine kinase, Classic
Blautia sp. OF01-4LB · GCF_003478165
ClassHKTypeClassicLength241 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003478165#DXA40_RS07185Stable P2CS identifier used across views.
GenomeGCF_003478165Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length241 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage160 / 241 aa (66.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa241 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
136-239 aa · 104 aa · 43.2% of protein
Raw token
HATPase_c:136:1.97e-31:239:107:109- Raw architecture: HisKA:33:0.000000152:88:56:64#HATPase_c:136:1.97e-31:239:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003478165::NZ_QUER01000003.1::G00094
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span435066-435791Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXA40_07190RefSeq proteinWP_103732468.1
Context group ID
GCF_003478165::NZ_QUER01000003.1::G00094Context members
DXA40_RS07185
Partner locus tags
DXA40_RS07185
Partner old locus tags
DXA40_07190
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_103732468.1Primary protein accession used for annex mappings.
UniProt accessionA0ABV1DLY7Primary UniProt accession resolved in the annex database.
UniProt IDA0ABV1DLY7_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXA40_RS07185Primary locus identifier stored in the genes table.
Old locus tagDXA40_07190Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUER01000003.1Sequence record reported by the local genomic context database.
Genomic interval435 066-435 791 nt726 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span435 066-435 791 ntGCF_003478165::NZ_QUER01000003.1::G00094
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003478165::NZ_QUER01000003.1::G00094Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUER01000003.1All displayed genes belong to this local TCS context.
Neighborhood span435 066-435 791 nt726 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
435 066 nt435 791 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DXA40_RS07185GCF_003478165#DXA40_RS07185
HKClassicCurrent focus
435 066-435 791 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003478165#DXA40_RS07185The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2922402
Simplified PFAM architecture for HKOC_2922402
PFAM domain coverage: 162 / 241 aa (67.2%)
1 aa241 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[32-89] | HATPase_c[137-240]
- Domain count: 2
- Matched identifier: HKOC_2922402
- Positioned domains: HisKA 32-89 ; HATPase_c 137-240
Cluster members and taxonomy
Representative gene: GCF_003478165#DXA40_RS07185
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 286 · GCF_003478165
AssemblyASM347816v1 · Scaffoldhaploid
Genome composition6 349 015 bp · 46,5% GCBlautia sp. OF01-4LB
Signal transduction countsGenes 264 · HK 135 · RR 125CheA 1 · PP 4
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key