1 HisKA#1
325-391 aa · 67 aa · 9.4% of protein
Raw token
HisKA:325:2.22e-17:391:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DWZ44_RS07805
Histidine kinase, Hybrid
Blautia sp. AF32-4BH · GCF_003460565
ClassHKTypeHybridLength713 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003460565#DWZ44_RS07805Stable P2CS identifier used across views.
GenomeGCF_003460565Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length713 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage303 / 713 aa (42.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa713 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
438-556 aa · 119 aa · 16.7% of protein
Raw token
HATPase_c:438:1.07e-28:556:119:1093 Response_reg#3
584-700 aa · 117 aa · 16.4% of protein
Raw token
Response_reg:584:1.12e-26:700:117:111- Raw architecture: HisKA:325:2.22e-17:391:67:64#HATPase_c:438:1.07e-28:556:119:109#Response_reg:584:1.12e-26:700:117:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003460565::NZ_QTVL01000005.1::G00039
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span44828-46969Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDWZ44_07820RefSeq proteinWP_117804670.1
Context group ID
GCF_003460565::NZ_QTVL01000005.1::G00039Context members
DWZ44_RS07805
Partner locus tags
DWZ44_RS07805
Partner old locus tags
DWZ44_07820
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_117804670.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDWZ44_RS07805Primary locus identifier stored in the genes table.
Old locus tagDWZ44_07820Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QTVL01000005.1Sequence record reported by the local genomic context database.
Genomic interval44 828-46 969 nt2 142 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span44 828-46 969 ntGCF_003460565::NZ_QTVL01000005.1::G00039
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003460565::NZ_QTVL01000005.1::G00039Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QTVL01000005.1All displayed genes belong to this local TCS context.
Neighborhood span44 828-46 969 nt2 142 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
44 828 nt46 969 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DWZ44_RS07805GCF_003460565#DWZ44_RS07805
HKHybridCurrent focus
44 828-46 969 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003481425#DXB83_RS15045Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0641390
Simplified PFAM architecture for HKOC_0641390
PFAM domain coverage: 301 / 761 aa (39.6%)
1 aa761 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[373-439] | HATPase_c[486-603] | Response_reg[632-747]
- Domain count: 3
- Matched identifier: HKOC_0641390
- Positioned domains: HisKA 373-439 ; HATPase_c 486-603 ; Response_reg 632-747
Cluster members and taxonomy
Representative gene: GCF_003481425#DXB83_RS15045
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 967 · GCF_003460565
AssemblyASM346056v1 · Scaffoldhaploid
Genome composition3 839 213 bp · 46,5% GCBlautia sp. AF32-4BH
Signal transduction countsGenes 91 · HK 46 · RR 43CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key