1 HisKA#1
656-722 aa · 67 aa · 7.5% of protein
Raw token
HisKA:656:0.0000000000000101:722:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DMI82_RS10060
Histidine kinase, Classic
Blautia sp. BCRC 81119 · GCF_003184505
ClassHKTypeClassicLength894 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003184505#DMI82_RS10060Stable P2CS identifier used across views.
GenomeGCF_003184505Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length894 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage160 / 894 aa (17.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa894 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
768-860 aa · 93 aa · 10.4% of protein
Raw token
HATPase_c:768:0.000000000044:860:97:109- Raw architecture: HisKA:656:0.0000000000000101:722:67:64#HATPase_c:768:0.000000000044:860:97:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003184505::NZ_QJHD01000014.1::G00007
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span28860-32288Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDMI82_10065RefSeq proteinWP_110103208.1
Context group ID
GCF_003184505::NZ_QJHD01000014.1::G00007Context members
DMI82_RS10055DMI82_RS10060
Partner locus tags
DMI82_RS10055DMI82_RS10060
Partner old locus tags
DMI82_10060DMI82_10065
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_110103208.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDMI82_RS10060Primary locus identifier stored in the genes table.
Old locus tagDMI82_10065Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QJHD01000014.1Sequence record reported by the local genomic context database.
Genomic interval29 604-32 288 nt2 685 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span28 860-32 288 ntGCF_003184505::NZ_QJHD01000014.1::G00007
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003184505::NZ_QJHD01000014.1::G00007Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QJHD01000014.1All displayed genes belong to this local TCS context.
Neighborhood span28 860-32 288 nt3 429 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
28 860 nt32 288 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DMI82_RS10055GCF_003184505#DMI82_RS10055
RROmpR
28 860-29 561 nt · Forward (+)
DMI82_RS10060GCF_003184505#DMI82_RS10060
HKClassicCurrent focus
29 604-32 288 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003184505#DMI82_RS10060The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0421093
Simplified PFAM architecture for HKOC_0421093
PFAM domain coverage: 159 / 894 aa (17.8%)
1 aa894 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[656-722] | HATPase_c[769-860]
- Domain count: 2
- Matched identifier: HKOC_0421093
- Positioned domains: HisKA 656-722 ; HATPase_c 769-860
Cluster members and taxonomy
Representative gene: GCF_003184505#DMI82_RS10060
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 212 480 · GCF_003184505
AssemblyASM318450v1 · Contighaploid
Genome composition4 097 535 bp · 44,0% GCBlautia sp. BCRC 81119
Signal transduction countsGenes 83 · HK 40 · RR 42CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key