1 HisKA#1
150-213 aa · 64 aa · 16.8% of protein
Raw token
HisKA:150:0.000000000018:213:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CN302_RS02300
Histidine kinase, Classic
Bacillus thuringiensis · GCF_002559875
ClassHKTypeClassicLength380 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002559875#CN302_RS02300Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length380 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 380 aa (45.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa380 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
262-370 aa · 109 aa · 28.7% of protein
Raw token
HATPase_c:262:5.64e-24:370:111:109- Raw architecture: HisKA:150:0.000000000018:213:64:64#HATPase_c:262:5.64e-24:370:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002559875::NZ_NTQF01000005.1::G00067
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span10401-12228Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCN302_02300RefSeq proteinWP_327911712.1
Context group ID
GCF_002559875::NZ_NTQF01000005.1::G00067Context members
CN302_RS02300CN302_RS02305
Partner locus tags
CN302_RS02300CN302_RS02305
Partner old locus tags
CN302_02300CN302_02305
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_327911712.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCN302_RS02300Primary locus identifier stored in the genes table.
Old locus tagCN302_02300Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NTQF01000005.1Sequence record reported by the local genomic context database.
Genomic interval10 401-11 543 nt1 143 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span10 401-12 228 ntGCF_002559875::NZ_NTQF01000005.1::G00067
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002559875::NZ_NTQF01000005.1::G00067Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NTQF01000005.1All displayed genes belong to this local TCS context.
Neighborhood span10 401-12 228 nt1 828 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
10 401 nt12 228 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
CN302_RS02300GCF_002559875#CN302_RS02300
HKClassicCurrent focus
10 401-11 543 nt · Reverse (-)
CN302_RS02305GCF_002559875#CN302_RS02305
RROmpR
11 533-12 228 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002550055#COM78_RS21050Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2611672
Simplified PFAM architecture for HKOC_2611672
PFAM domain coverage: 172 / 380 aa (45.3%)
1 aa380 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[151-213] | HATPase_c[262-370]
- Domain count: 2
- Matched identifier: HKOC_2611672
- Positioned domains: HisKA 151-213 ; HATPase_c 262-370
Cluster members and taxonomy
Representative gene: GCF_002550055#COM78_RS21050
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 428 · GCF_002559875
AssemblyASM255987v1 · Scaffoldhaploid
Genome composition6 233 011 bp · 34,5% GCBacillus thuringiensis
Signal transduction countsGenes 128 · HK 68 · RR 59CheA 1 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key