1 HisKA#1
134-186 aa · 53 aa · 14.7% of protein
Raw token
HisKA:134:0.00000797:186:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CN474_RS06660
Histidine kinase, Classic
Bacillus thuringiensis · GCF_002558385
ClassHKTypeClassicLength360 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002558385#CN474_RS06660Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length360 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage164 / 360 aa (45.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa360 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
234-344 aa · 111 aa · 30.8% of protein
Raw token
HATPase_c:234:8e-25:344:111:109- Raw architecture: HisKA:134:0.00000797:186:53:64#HATPase_c:234:8e-25:344:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002558385::NZ_NTXT01000012.1::G00014
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span228609-230388Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCN474_06660RefSeq proteinWP_000865403.1
Context group ID
GCF_002558385::NZ_NTXT01000012.1::G00014Context members
CN474_RS06655CN474_RS06660
Partner locus tags
CN474_RS06655CN474_RS06660
Partner old locus tags
CN474_06655CN474_06660
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000865403.1Primary protein accession used for annex mappings.
UniProt accessionA0A1W6WT83Primary UniProt accession resolved in the annex database.
UniProt IDA0A1W6WT83_BACTUDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCN474_RS06660Primary locus identifier stored in the genes table.
Old locus tagCN474_06660Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NTXT01000012.1Sequence record reported by the local genomic context database.
Genomic interval229 306-230 388 nt1 083 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span228 609-230 388 ntGCF_002558385::NZ_NTXT01000012.1::G00014
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002558385::NZ_NTXT01000012.1::G00014Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NTXT01000012.1All displayed genes belong to this local TCS context.
Neighborhood span228 609-230 388 nt1 780 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
228 609 nt230 388 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
CN474_RS06655GCF_002558385#CN474_RS06655
RROmpR
228 609-229 316 nt · Forward (+)
CN474_RS06660GCF_002558385#CN474_RS06660
HKClassicCurrent focus
229 306-230 388 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000161495#BTHUR0002_RS22760Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2747018
Simplified PFAM architecture for HKOC_2747018
PFAM domain coverage: 112 / 360 aa (31.1%)
1 aa360 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[234-345]
- Domain count: 1
- Matched identifier: HKOC_2747018
- Positioned domains: HATPase_c 234-345
Cluster members and taxonomy
Representative gene: GCF_000161495#BTHUR0002_RS22760
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 428 · GCF_002558385
AssemblyASM255838v1 · Scaffoldhaploid
Genome composition6 138 536 bp · 34,5% GCBacillus thuringiensis
Signal transduction countsGenes 120 · HK 65 · RR 55CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key