1 HisKA#1
168-227 aa · 60 aa · 15.9% of protein
Raw token
HisKA:168:0.000000000000419:227:61:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CN595_RS16070
Histidine kinase, Classic
Bacillus wiedmannii · GCF_002554835
ClassHKTypeClassicLength377 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_002554835#CN595_RS16070Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length377 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage165 / 377 aa (43.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa377 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
271-375 aa · 105 aa · 27.9% of protein
Raw token
HATPase_c:271:1.07e-20:375:109:109- Raw architecture: HisKA:168:0.000000000000419:227:61:64#HATPase_c:271:1.07e-20:375:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_002554835::NZ_NUCH01000035.1::G00024
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span14441-15574Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCN595_16075RefSeq proteinWP_098136877.1
Context group ID
GCF_002554835::NZ_NUCH01000035.1::G00024Context members
CN595_RS16070
Partner locus tags
CN595_RS16070
Partner old locus tags
CN595_16075
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_098136877.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCN595_RS16070Primary locus identifier stored in the genes table.
Old locus tagCN595_16075Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NUCH01000035.1Sequence record reported by the local genomic context database.
Genomic interval14 441-15 574 nt1 134 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span14 441-15 574 ntGCF_002554835::NZ_NUCH01000035.1::G00024
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002554835::NZ_NUCH01000035.1::G00024Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NUCH01000035.1All displayed genes belong to this local TCS context.
Neighborhood span14 441-15 574 nt1 134 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
14 441 nt15 574 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
CN595_RS16070GCF_002554835#CN595_RS16070
HKClassicCurrent focus
14 441-15 574 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002554835#CN595_RS16070The current gene is the representative for this cluster.
PFAM architectureHisK_N + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2635560
Simplified PFAM architecture for HKOC_2635560
PFAM domain coverage: 291 / 377 aa (77.2%)
1 aa377 aa
HisK_NHisKAHATPase_c
- Simplified architecture: HisK_N + HisKA + HATPase_c
- Raw architecture: HisK_N[16-144] | HisKA[168-227] | HATPase_c[274-375]
- Domain count: 3
- Matched identifier: HKOC_2635560
- Positioned domains: HisK_N 16-144 ; HisKA 168-227 ; HATPase_c 274-375
Cluster members and taxonomy
Representative gene: GCF_002554835#CN595_RS16070
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 890 302 · GCF_002554835
AssemblyASM255483v1 · Scaffoldhaploid
Genome composition5 531 413 bp · 35,0% GCBacillus wiedmannii
Signal transduction countsGenes 121 · HK 64 · RR 57CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key