1 HisKA#1
121-172 aa · 52 aa · 15.3% of protein
Raw token
HisKA:121:0.000000573:172:58:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CON29_RS06510
Histidine kinase, Classic
Bacillus thuringiensis · GCF_002550605
ClassHKTypeClassicLength340 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002550605#CON29_RS06510Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length340 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage162 / 340 aa (47.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa340 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-330 aa · 110 aa · 32.4% of protein
Raw token
HATPase_c:221:4.32e-20:330:110:109- Raw architecture: HisKA:121:0.000000573:172:58:64#HATPase_c:221:4.32e-20:330:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002550605::NZ_NVMK01000007.1::G00061
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span332254-333944Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCON29_06515RefSeq proteinWP_097821635.1
Context group ID
GCF_002550605::NZ_NVMK01000007.1::G00061Context members
CON29_RS06505CON29_RS06510
Partner locus tags
CON29_RS06505CON29_RS06510
Partner old locus tags
CON29_06510CON29_06515
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_097821635.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCON29_RS06510Primary locus identifier stored in the genes table.
Old locus tagCON29_06515Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NVMK01000007.1Sequence record reported by the local genomic context database.
Genomic interval332 922-333 944 nt1 023 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span332 254-333 944 ntGCF_002550605::NZ_NVMK01000007.1::G00061
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002550605::NZ_NVMK01000007.1::G00061Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NVMK01000007.1All displayed genes belong to this local TCS context.
Neighborhood span332 254-333 944 nt1 691 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
332 254 nt333 944 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
CON29_RS06505GCF_002550605#CON29_RS06505
RROmpR
332 254-332 925 nt · Forward (+)
CON29_RS06510GCF_002550605#CON29_RS06510
HKClassicCurrent focus
332 922-333 944 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002550605#CON29_RS06510The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2837152
Simplified PFAM architecture for HKOC_2837152
PFAM domain coverage: 110 / 340 aa (32.4%)
1 aa340 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[221-330]
- Domain count: 1
- Matched identifier: HKOC_2837152
- Positioned domains: HATPase_c 221-330
Cluster members and taxonomy
Representative gene: GCF_002550605#CON29_RS06510
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 428 · GCF_002550605
AssemblyASM255060v1 · Scaffoldhaploid
Genome composition5 585 308 bp · 35,0% GCBacillus thuringiensis
Signal transduction countsGenes 108 · HK 59 · RR 49CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key